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Protein
Submitted name:

Type III secretion outer membrane pore, YscC/HrcC family

Gene

BURPS1106A_A2165

Organism
Burkholderia pseudomallei (strain 1106a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:BURPS1106A_A2165Imported
OrganismiBurkholderia pseudomallei (strain 1106a)Imported
Taxonomic identifieri357348 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
Proteomesi
  • UP000006738 Componenti: Chromosome II

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500265742223 – 599Sequence analysisAdd BLAST577

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 348Secretin_NInterPro annotationAdd BLAST174

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000214462.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

A3P788-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAKIPVLLS LLCSLASLSV DAAPIRWRSA DIQYAAEGKD VKDVLRDLAA
60 70 80 90 100
SQNIAANVAP GVSGAVSGKM KMSPQRFLDT LAASFGFVWY YDGTVLYVTP
110 120 130 140 150
ASDMKSTLVK LDHANTGDLR DLLEQMKVAD SRYPITYNAQ QRTALVAGPA
160 170 180 190 200
RYVELVTSVA ARLDENSART GGTQIRVFSL KHAWAADRDV NVDGTAVSMP
210 220 230 240 250
GVASLLNRMY HPGEGKRASQ TTLGKPISRA APMTDLGGGR SGVPPLPPYM
260 270 280 290 300
QAAQSGDGAA MPAGVPGVPG GDPRPSGMVA AAIANPGAAR APGGGMPDAN
310 320 330 340 350
GVPAGAGDAA DLPVIQADPR TNSILVRDVP EHMAQYPDLI ALLDVKPRLI
360 370 380 390 400
EIEARIIEID EGALKQLGVD WRAHNSHFDL QTGTGLTSQN GYANGTLNPT
410 420 430 440 450
FGSITLSGND SVGVPASPLG LSLTAVLGDA GRYLLARINA LESSNQARTD
460 470 480 490 500
ASPKVTTLDN VEAVMDNKKQ FFVRVAGYTS ADLYSISTGV SLRVLPMVVD
510 520 530 540 550
EGGRTQIKLD VRIVDGELSQ QTVDNIPVIV SNEINTQAFI EQGQALLIAG
560 570 580 590
YKVDARSSTQ SGVPVLSKLP LVGALFRSTD KQNSHSERLF LVTPRVIEP
Length:599
Mass (Da):63,120
Last modified:April 3, 2007 - v1
Checksum:i61D105457A6696FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000573 Genomic DNA. Translation: ABN94368.1.
RefSeqiWP_004537607.1. NC_009078.1.

Genome annotation databases

EnsemblBacteriaiABN94368; ABN94368; BURPS1106A_A2165.
KEGGibpl:BURPS1106A_A2165.
PATRICi19230302. VBIBurPse14980_5767.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000573 Genomic DNA. Translation: ABN94368.1.
RefSeqiWP_004537607.1. NC_009078.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN94368; ABN94368; BURPS1106A_A2165.
KEGGibpl:BURPS1106A_A2165.
PATRICi19230302. VBIBurPse14980_5767.

Phylogenomic databases

HOGENOMiHOG000214462.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA3P788_BURP0
AccessioniPrimary (citable) accession number: A3P788
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 2, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.