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Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT

Organism
Burkholderia pseudomallei (strain 1106a)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBPSE357348:GHVF-4481-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:BURPS1106A_A0396Imported
OrganismiBurkholderia pseudomallei (strain 1106a)Imported
Taxonomic identifieri357348 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
ProteomesiUP000006738 Componenti: Chromosome II

Interactioni

Protein-protein interaction databases

STRINGi357348.BURPS1106A_A0396.

Structurei

3D structure databases

SMRiA3P279. Positions 2-422.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiHYVEMIS.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3P279-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA
60 70 80 90 100
VLNTGHRHPR IVKAIADQLG QFTHTAYQIV PYASYVELAE KINARAPIAQ
110 120 130 140 150
PKKTAFFTTG AEAVENAVKI ARAYTGRPGM IAFAGGFHGR TMMGMALTGK
160 170 180 190 200
VAPYKIGFGP FPGDVFHAPY PNALHGVTSA DSIAAVETLF KADIDPKRVA
210 220 230 240 250
AIIFEPVQGE GGFNPAPAEF VRALRKLCDA HGILLIADEV QTGFARTGKL
260 270 280 290 300
FAMEHYDVSA DLMTIAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN
310 320 330 340 350
PLAVAAAHAV LDVIDEEKLA ERATVLGDKL KAKLAALRAE LPQIVDVRGP
360 370 380 390 400
GAMVAAEFVD PHTRASDAAF TKRVQTLALE RGLLLLICGV DANVIRFLFP
410 420
LTIEDAVFDE ALGILESVLR EAVGVPA
Length:427
Mass (Da):45,151
Last modified:April 3, 2007 - v1
Checksum:i370984C50CF7A603
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000573 Genomic DNA. Translation: ABN92795.1.
RefSeqiYP_001074439.1. NC_009078.1.

Genome annotation databases

EnsemblBacteriaiABN92795; ABN92795; BURPS1106A_A0396.
KEGGibpl:BURPS1106A_A0396.
PATRICi19227138. VBIBurPse14980_4194.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000573 Genomic DNA. Translation: ABN92795.1.
RefSeqiYP_001074439.1. NC_009078.1.

3D structure databases

SMRiA3P279. Positions 2-422.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi357348.BURPS1106A_A0396.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN92795; ABN92795; BURPS1106A_A0396.
KEGGibpl:BURPS1106A_A0396.
PATRICi19227138. VBIBurPse14980_4194.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiHYVEMIS.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciBPSE357348:GHVF-4481-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. DeShazer D., Woods D.E., Nierman W.C.
    Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1106aImported.

Entry informationi

Entry nameiA3P279_BURP0
AccessioniPrimary (citable) accession number: A3P279
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: April 1, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.