Reviewed,
UniProtKB/Swiss-Prot A3NY37 (RNPH_BURP0)
Last modified
November 3, 2009.
Version 19.
History...
Clusters with 100%,
90%,
50% identity |
Documents (1) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Ribonuclease PH Short name=RNase PH EC=2.7.7.56 Alternative name(s): tRNA nucleotidyltransferase | ||||
| Gene names |
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| Organism | Burkholderia pseudomallei (strain 1106a) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 357348 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group |
Protein attributes
| Sequence length | 243 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. |
| Catalytic activity | tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. HAMAP MF_00564 |
| Sequence similarities | Belongs to the RNase PH family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | tRNA processing |
| Molecular function | Nucleotidyltransferase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | tRNA processing Inferred from electronic annotation. Source: HAMAP |
| Molecular function | 3'-5'-exoribonuclease activity Inferred from electronic annotation. Source: InterPro tRNA bindingInferred from electronic annotation. Source: HAMAP tRNA nucleotidyltransferase activityInferred from electronic annotation. Source: HAMAP tRNA-specific ribonuclease activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 243 | 243 | Ribonuclease PH HAMAP MF_00564 | PRO_1000024788 | |||
Sequences
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References
| [1] | DeShazer D., Woods D.E., Nierman W.C. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| CP000572 Genomic DNA. Translation: ABN91374.1. | |
| RefSeq | YP_001067258.1. |
3D structure databases | |
| SMR | A3NY37. Positions 7-241. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A3NY37. |
Genome annotation databases | |
| GeneID | 4900473. |
| GenomeReviews | Gene locus BURPS1106A_3017 in contig CP000572_GR. |
| KEGG | bpl:BURPS1106A_3017. |
| TIGR | BURPS1106A_3017. |
Phylogenomic databases | |
| OMA | YAMLPRA. |
Family and domain databases | |
| HAMAP | MF_00564. [Tree] |
| InterPro | IPR001247. ExoRNase_PH_dom1. IPR015847. ExoRNase_PH_dom2. IPR018336. Ribonuclease-PH_CS. IPR002381. RNase_PH_bac-type. [Graphical view] |
| Pfam | PF01138. RNase_PH. 1 hit. PF03725. RNase_PH_C. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01966. RNasePH. 1 hit. |
| PROSITE | PS01277. RIBONUCLEASE_PH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | RNPH_BURP0 | ||||||||
| Accession | Primary (citable) accession number: A3NY37 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||

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