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A3NP32 (A3NP32_BURP6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ligD EMBL ABN87546.1
Ordered Locus Names:BURPS668_A3112 EMBL ABN87546.1
OrganismBurkholderia pseudomallei (strain 668) [Complete proteome] [HAMAP] EMBL ABN87546.1
Taxonomic identifier320373 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Protein attributes

Sequence length1157 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A3NP32 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: 995A6A8FEAE658FD

FASTA1,157124,771
        10         20         30         40         50         60 
MAGKLSVYRS RRRFGETPEP EGARRSPRRT KGAGRAGDES KRRARGERVA RRGRAQQPAP 

        70         80         90        100        110        120 
ARRRSALHYV IQEHHARRLH YDFRLELDGT LKSWAIPKGP SLDPSVKRLA VHVEDHPLEY 

       130        140        150        160        170        180 
AAFEGEIPEG HYGAGSVIVW DRGAWTPAGG IAAARAGYRA GKLSFTLDGD KLHGGWALVR 

       190        200        210        220        230        240 
GRGLRDSGGK HEQWLLIKER DGDARDQADY DVLRARPGSV LGGARSGRAR RGRAAEPTER 

       250        260        270        280        290        300 
DAAAPKRARA SVPKGRAEAK TSGRAPRTVS NGTAGAGKGA SKRASKREGT NTGNGARSGK 

       310        320        330        340        350        360 
GSGKGSGKGA GKGGATPRRK RAAAPQSFDV DSADTDSPAA RGLALPAGLA ARFGLSGAKR 

       370        380        390        400        410        420 
AALPRTLRPQ LATLVDAPPP GKDWLYEAKF DGYRVLIRID RAAASRPIAV HTREGLDWSA 

       430        440        450        460        470        480 
KFAAQLDALA RLPVDRGWLD GEAVVLDRAG VPDFQALQNA LGAGRSNDVT LFLFDVPFLN 

       490        500        510        520        530        540 
GFDLRGVPLE RRRALLAALV AAHASDVLRY SESLAFEAAD LLTGACDAGL EGLIGKRRDG 

       550        560        570        580        590        600 
RYVEGRSRSW IKLKCRRRQE FVIGGYTEPA GRRSGFGALL LGVYARAPGD EGDEGERRTR 

       610        620        630        640        650        660 
GAAETRDERR RASHASHASR TSRTSRAPDA GAARAPQARP LALRYVGRVG TGFGERTLRA 

       670        680        690        700        710        720 
LARTLREHET GRMPFADVPR ERSGTPVHWV KPVLVAECEF AEWTGDGIVR QASFVGLRED 

       730        740        750        760        770        780 
KPARTIVREQ PQSMETEAMN EHADEHTDEH TDARAERRTG GRTRRKARDG GARDAPPLAR 

       790        800        810        820        830        840 
HPKRGVAGSS TRKGARDGEA GKRAAAGSSP SSSPSSSTSP SISASGRTRG GGRSASRDRA 

       850        860        870        880        890        900 
GDADEGANEG ANDHAPRERA GAPKVAGVRV SHPGRVIDPH TGTRKLDLVE YWEWIAPWLL 

       910        920        930        940        950        960 
PHLKGRPVSL VRAPADIGGE LFFQKHADKL EIPNVALHAG LDPGHEALIT IDDVKGLVGA 

       970        980        990       1000       1010       1020 
AQMGTIELHT WNAHVSNIEK PDRAVFDLDP DPSLDWRAVI EAAQLTRALL DELGLVSFCK 

      1030       1040       1050       1060       1070       1080 
TSGGKGLHVV VPLARHAGWD DVKAFAHAVA RHMAATLPER FTATMGPRNR KGKIFVDYLR 

      1090       1100       1110       1120       1130       1140 
NNRGASTIAA YSVRARPGLG VSVPIAWDEL PDTTGAAQWT LANLHERLDA LKHDPWRAYA 

      1150 
HVRQRVTAAL RKRLSDG 

« Hide

References

[1]DeShazer D., Woods D.E., Nierman W.C.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 668 EMBL ABN87546.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000571 Genomic DNA. Translation: ABN87546.1.
RefSeqYP_001064103.1. NC_009075.1.

3D structure databases

ProteinModelPortalA3NP32.
SMRA3NP32. Positions 866-1154.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING320373.BURPS668_A3112.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN87546; ABN87546; BURPS668_A3112.
GeneID4887264.
KEGGbpd:BURPS668_A3112.
PATRIC19259188. VBIBurPse82117_6494.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBCLSK711266.

Enzyme and pathway databases

BioCycBPSE320373:GJ9C-7020-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 2 hits.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 2 hits.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3NP32_BURP6
AccessionPrimary (citable) accession number: A3NP32
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)