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Protein
Submitted name:

Type III secretion outer membrane pore, YscC/HrcC family

Gene

BURPS668_A2249

Organism
Burkholderia pseudomallei (strain 668)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:BURPS668_A2249Imported
OrganismiBurkholderia pseudomallei (strain 668)Imported
Taxonomic identifieri320373 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
Proteomesi
  • UP000002153 Componenti: Chromosome II

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500265671323 – 601Sequence analysisAdd BLAST579

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 350Secretin_NInterPro annotationAdd BLAST176

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000214462.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

A3NLM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAKIPVLLS LLCSLASLSV DAAPIRWRSA DIQYAAEGKD VKDVLRDLAA
60 70 80 90 100
SQNIAANVAP GVSGAVSGKM KMSPQRFLDT LAASFGFVWY YDGTVLYVTP
110 120 130 140 150
ASDMKSTLVK LDHANTGDLR DLLEQMKVAD SRYPITYNAQ QRTALVAGPA
160 170 180 190 200
RYVELVTSVA ARLDENSART GGTQIRVFSL KHAWAADRDV NVDGTAVSMP
210 220 230 240 250
GVASLLNRMY HPGEGKRASQ TTLGKPISRA APMTDLGGGR SGVPPPPLPP
260 270 280 290 300
YMQAAQSGDG AAMPAGVPGV PGGDPRPSGM VAAAIANPGA ARAPGGGMPD
310 320 330 340 350
ANGVPAGAGD AADLPVIQAD PRTNSILVRD VPEHMAQYPD LIALLDVKPR
360 370 380 390 400
LIEIEARIIE IDEGALKQLG VDWRAHNSHF DLQTGTGLTS QNGYANGTLN
410 420 430 440 450
PTFGSITLSG NDSVGVPASP LGLSLTAVLG DAGRYLLARI NALESSNQAR
460 470 480 490 500
TDASPKVTTL DNVEAVMDNK KQFFVRVAGY TSADLYSIST GVSLRVLPMV
510 520 530 540 550
VDEGGRTQIK LDVRIVDGEL SQQTVDNIPV IVSNEINTQA FIEQGQALLI
560 570 580 590 600
AGYKVDARSS TQSGVPVLSK LPLVGALFRS TDKQNSHSER LFLVTPRVIE

P
Length:601
Mass (Da):63,314
Last modified:April 3, 2007 - v1
Checksum:iA174017978EC0F13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000571 Genomic DNA. Translation: ABN88189.1.
RefSeqiWP_011853504.1. NC_009075.1.

Genome annotation databases

EnsemblBacteriaiABN88189; ABN88189; BURPS668_A2249.
KEGGibpd:BURPS668_A2249.
PATRICi19257645. VBIBurPse82117_5727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000571 Genomic DNA. Translation: ABN88189.1.
RefSeqiWP_011853504.1. NC_009075.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN88189; ABN88189; BURPS668_A2249.
KEGGibpd:BURPS668_A2249.
PATRICi19257645. VBIBurPse82117_5727.

Phylogenomic databases

HOGENOMiHOG000214462.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA3NLM2_BURP6
AccessioniPrimary (citable) accession number: A3NLM2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 2, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.