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Reviewed, UniProtKB/Swiss-Prot A3N398 (SYGA_ACTP2)

Last modified November 3, 2009. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Glycyl-tRNA synthetase alpha subunit
    EC=6.1.1.14
Alternative name(s):
    Glycine--tRNA ligase alpha subunit
      Short name=GlyRS
Gene names
Name: glyQ
Ordered Locus Names: APL_1800
OrganismActinobacillus pleuropneumoniae serotype 5b (strain L20) [Complete proteome] [HAMAP]
Taxonomic identifier416269 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeActinobacillus

Protein attributes

Sequence length301 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254

Subunit structure

Tetramer of two alpha and two beta subunits By similarity.

Subcellular location

Cytoplasm. HAMAP MF_00254

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

glycine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 301301Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
PRO_1000047392

Sequences

Sequence LengthMass (Da)Tools
A3N398-1 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: AFEF0EED00EF1389

FASTA30134,357
        10         20         30         40         50         60 
MTTKFNVKTF QGMILALQDY WANVGCTIVQ PFDMEVGAGT SHPMTALRAL GPEPMAFAYV 

        70         80         90        100        110        120 
QPSRRPTDGR YGENPNRLQH YYQFQVVIKP SPDNIQELYL GSLKMLGFDP TQHDIRFVED 

       130        140        150        160        170        180 
NWENPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGLECKPV TGEVTYGLER LAMYIQGVDS 

       190        200        210        220        230        240 
VYDLVWSDGP LGKTTYGDVF HQNEVEQSTY NFEYADVDFL FKAFEQYEKE ATELLALEKP 

       250        260        270        280        290        300 
LPLPAYERIL KAAHSFNMLD ARKAISVTER QRYILRIRTL TKGVAEAYYV SREALGFPGC 


K 

« Hide

References

[1]"The complete genome sequence of Actinobacillus pleuropneumoniae L20 (serotype 5b)."
Foote S.J., Bosse J.T., Bouevitch A.B., Langford P.R., Young N.M., Nash J.H.E.
J. Bacteriol. 190:1495-1496(2008) [PubMed: 18065534] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP000569 Genomic DNA. Translation: ABN74884.1.
RefSeqYP_001054489.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA3N398.

Genome annotation databases

GeneID4849764.
GenomeReviewsGene locus APL_1800 in contig CP000569_GR.
KEGGapl:APL_1800.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMACRRPTDG.

Family and domain databases

HAMAPMF_00254.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
ProDomPD006985. tRNA_synt_2e. 2 hits.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00388. glyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYGA_ACTP2
AccessionPrimary (citable) accession number: A3N398
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 3, 2007
Last modified: November 3, 2009
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents