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Protein
Submitted name:

Mannose permease IIC component

Gene

ptnC

Organism
Actinobacillus pleuropneumoniae serotype 5b (strain L20)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Mannose permease IIC componentImported
Gene namesi
Name:ptnCImported
Ordered Locus Names:APL_1392Imported
OrganismiActinobacillus pleuropneumoniae serotype 5b (strain L20)Imported
Taxonomic identifieri416269 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeActinobacillus
Proteomesi
  • UP000001432 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 24HelicalSequence analysisAdd BLAST19
Transmembranei33 – 56HelicalSequence analysisAdd BLAST24
Transmembranei62 – 87HelicalSequence analysisAdd BLAST26
Transmembranei94 – 118HelicalSequence analysisAdd BLAST25
Transmembranei138 – 161HelicalSequence analysisAdd BLAST24
Transmembranei173 – 197HelicalSequence analysisAdd BLAST25
Transmembranei209 – 239HelicalSequence analysisAdd BLAST31

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi416269.APL_1392.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105ETZ. Bacteria.
COG3715. LUCA.
HOGENOMiHOG000097554.
KOiK02795.
OMAiACIAGMD.

Family and domain databases

InterProiIPR004700. PTS_IIC_man.
[Graphical view]
PANTHERiPTHR32502:SF4. PTHR32502:SF4. 1 hit.
PfamiPF03609. EII-Sor. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00822. EII-Sor. 1 hit.
PROSITEiPS51106. PTS_EIIC_TYPE_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3N240-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEISTLQVIL VFLVSCICGA GSILDEFQTH RPLIACTLIG LVLGDVKTGV
60 70 80 90 100
IVGGSLELLA LGWMNIGAAL APDAALASVI STILVIVGGQ DIATGIAVAI
110 120 130 140 150
PLAAAGQVLT YVVRAITVGF QHAADKSVLD GNLNRLDWIH FGALMLQAMR
160 170 180 190 200
IAIPALIVAL TAGTDVVQTM LNAIPEVVTT GLKIAGGFIA VVGYAMVINM
210 220 230 240 250
MRAGHLMPFF YAGFVIAAFT DFNLVALGVL GTIMAVLYIQ IHPKYNKSQQ
260
VVVAANQDND LDNRLD
Length:266
Mass (Da):27,867
Last modified:April 3, 2007 - v1
Checksum:iA7EB04A94398A9FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000569 Genomic DNA. Translation: ABN74476.1.
RefSeqiWP_005598566.1. NC_009053.1.

Genome annotation databases

EnsemblBacteriaiABN74476; ABN74476; APL_1392.
GeneIDi4850313.
KEGGiapl:APL_1392.
PATRICi20747769. VBIActPle94089_1450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000569 Genomic DNA. Translation: ABN74476.1.
RefSeqiWP_005598566.1. NC_009053.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi416269.APL_1392.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN74476; ABN74476; APL_1392.
GeneIDi4850313.
KEGGiapl:APL_1392.
PATRICi20747769. VBIActPle94089_1450.

Phylogenomic databases

eggNOGiENOG4105ETZ. Bacteria.
COG3715. LUCA.
HOGENOMiHOG000097554.
KOiK02795.
OMAiACIAGMD.

Family and domain databases

InterProiIPR004700. PTS_IIC_man.
[Graphical view]
PANTHERiPTHR32502:SF4. PTHR32502:SF4. 1 hit.
PfamiPF03609. EII-Sor. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00822. EII-Sor. 1 hit.
PROSITEiPS51106. PTS_EIIC_TYPE_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA3N240_ACTP2
AccessioniPrimary (citable) accession number: A3N240
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 30, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.