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A3MVZ1 (A3MVZ1_PYRCJ) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit EMBL ABO08808.1
EC=1.3.99.1 EMBL ABO08808.1
Gene names
Ordered Locus Names:Pcal_1388
OrganismPyrobaculum calidifontis (strain JCM 11548 / VA1) [Complete proteome] [HAMAP]
Taxonomic identifier410359 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Pyrobaculum

Protein attributes

Sequence length580 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A3MVZ1 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: AFB0B247C932FFE0

FASTA58063,349
        10         20         30         40         50         60 
MEVLSCDVVV VGSGLAGLRA AVAAAAASEK LSICVVTKVA GPRSHTISAE GGMAAVVHPE 

        70         80         90        100        110        120 
KTGDTPHLHA YDTVKGGDFL VDQDAAMLLA QEAPSEALFL YKIGVPWNKD SDGTFSLRLF 

       130        140        150        160        170        180 
GGMSKPRTLF VKDKTGFYIL TALYKHAKSF SNIAFYEEHL VTKLVVKHNV FYGVTALDMR 

       190        200        210        220        230        240 
RGEFKFFKAK AGVIATGGGG RMFKLTTMGY LNTGEVYGFA LREGIALKDM EFVQWHPTAL 

       250        260        270        280        290        300 
VPSGILISEA ARAEGAYLVN KYGERFMRRY APQKMELAPR DVIARAIAME CMSGRGFTWR 

       310        320        330        340        350        360 
DGTCYVGLDV RHLDPARVKE RLPLLLELSK TYAGVDPFTE LIPVAPAVHY FMGGIHTDLY 

       370        380        390        400        410        420 
GRVLTVSGEW VRGLWAAGEA AAVSVHGANR LGSNSLAECA VWGRLAGEQA AEYAKGRGEG 

       430        440        450        460        470        480 
EADGAVKALV EREENRVFYK LGRKEVGGTS AAAIRSALQN AMHKGAGIIR EESALAQALS 

       490        500        510        520        530        540 
EVAKLISAFK EVNLHDTGRI YNMELREMVE LDGMLLAAHA VLLGAYFRRE SRGAHYRVDH 

       550        560        570        580 
PQRDDKTWLK HTLVHKVGEG FGVYYAPVKV DKWPPEVRAY

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References

[1]"Complete sequence of Pyrobaculum calidifontis JCM 11548."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Cozen A.E., Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 11548 / VA1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000561 Genomic DNA. Translation: ABO08808.1.
RefSeqYP_001056274.1. NC_009073.1.

3D structure databases

ProteinModelPortalA3MVZ1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3MVZ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4909038.
GenomeReviewsGene locus Pcal_1388 in contig CP000561_GR.
KEGGpcl:Pcal_1388.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGarNOG04875.
HOGENOMHBG293998.
OMAGRIYNME.
PhylomeDBA3MVZ1.
ProtClustDBPRK06069.

Family and domain databases

InterProIPR003953. FAD_bind2_N.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR004112. Fum_Rdtase/Succ_DH_flav_C.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
Gene3DG3DSA:1.20.58.100. Fum_Rdtase/Succ_DH_flav-like_C. 1 hit.
KOK00239.
PANTHERPTHR11632:SF5. PTHR11632:SF5. 1 hit.
PfamPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMSSF46977. Succ_DH_flav_C. 1 hit.
TIGRFAMsTIGR01812. SdhA_frdA_Gneg. 1 hit.
PROSITEPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3MVZ1_PYRCJ
AccessionPrimary (citable) accession number: A3MVZ1
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 16, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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