A3MTN9 (A3MTN9_PYRCJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isocitrate dehydrogenase (NADP) EMBL ABO08006.1
EC=1.1.1.42 EMBL ABO08006.1

Gene names

Ordered Locus Names:

Pcal_0579

Organism

Pyrobaculum calidifontis (strain JCM 11548 / VA1) [Complete proteome] [HAMAP] EMBL ABO08006.1

Taxonomic identifier

410359 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Pyrobaculum › Pyrobaculum calidifontis

Protein attributes

Sequence length	438 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004444 EMBL ABO08006.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro isocitrate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3MTN9 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: 91C2D7E91C10DE57	FASTA	438	49,124
	10 20 30 40 50 60 MSINLDKLRE SIPNLVPYNG KYVEPPEGEY VQYTGPGQLK VPDKVVIGYI EGDGIGPEVA 70 80 90 100 110 120 YAAIRVANAA VEKAYGKARK IIWYEVVVGE KAEKLFGNRL PDQSIEVLKK VKVFLKAPLE 130 140 150 160 170 180 TPVGGGFRSI NVTLRQLFDL YANIRPVKYF PGLPSPLKKP QVDLVIFREN TEDVYAGIEW 190 200 210 220 230 240 PYNSPEAAKL REFLKREFGI SIRDDAGIGI KPISKFGTQR IARLALKFAV ENKRRVVTVM 250 260 270 280 290 300 HKGNIQKYTE GAFREWAFEV ARNEFRDYVV FEDELAQYGG KVPPGKILVN DRIADNMLQQ 310 320 330 340 350 360 LLTRTNEYDV ILAPNLNGDY VSDEAAGLVG GLGVAPGLDV GDWGMMAEPV HGTAPKYRGK 370 380 390 400 410 420 NYVNPTATIL ALELLLRFMG WREAADLIMK GIEKAYTEGY FTGDLARQMD EEERKQRVKE 430 VLGTQEFADK VVELIKEL

References

[1]

"Complete sequence of Pyrobaculum calidifontis JCM 11548." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Cozen A.E., Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCM 11548 / VA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000561 Genomic DNA. Translation: ABO08006.1.
RefSeq	YP_001055472.1. NC_009073.1.
3D structure databases
ProteinModelPortal	A3MTN9.
SMR	A3MTN9. Positions 21-438.
ModBase	Search...
Protein-protein interaction databases
STRING	410359.Pcal_0579.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABO08006; ABO08006; Pcal_0579.
GeneID	4909734.
KEGG	pcl:Pcal_0579.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0538.
HOGENOM	HOG000021113.
KO	K00031.
OMA	FRDWGYE.
ProtClustDB	CLSK631709.
Enzyme and pathway databases
BioCyc	PCAL410359:GIX2-589-MONOMER.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR019818. IsoCit/isopropylmalate_DH_CS. IPR001804. Isocitrate/isopropylmalate_DH. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 1 hit. [Graphical view]
PROSITE	PS00470. IDH_IMDH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3MTN9_PYRCJ

Accession

Primary (citable) accession number: A3MTN9

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)