A3MSP2 (A3MSP2_PYRCJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, catalytic region EMBL ABO07659.1

Gene names

Ordered Locus Names:

Pcal_0222

Organism

Pyrobaculum calidifontis (strain JCM 11548 / VA1) [Complete proteome] [HAMAP]

Taxonomic identifier

410359 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Pyrobaculum

Protein attributes

Sequence length	529 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3MSP2 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: 1025F38A632FDB93	FASTA	529	58,413
	10 20 30 40 50 60 MCVVEKWRED PFYGAVAVVK AEGYVVGDFT GGIHGAFRDY VELPPGVYTV GGEECAIEPL 70 80 90 100 110 120 SYPWHFSVPY MAARWGDVVE LRIYATEELE VPGGFVAKLA DVGPFSVYLA ATRGASYVVK 130 140 150 160 170 180 CCGRSRRFKA PHPGEAPRLS ALYEVLPDRA GPGRGCRDLS KQFCGGTLKD VAELAAGAVD 190 200 210 220 230 240 FADGLYLHPI YPAMSYHRYD VVNHFDVDER VGGWAAFYAL KEALSKVGMG LVLDLVLYHV 250 260 270 280 290 300 APRSPLFPDG PFVIKSAEGA RLVKKLVEIL PREALRGVFS GEPPYETFLK VWLMPRLDYT 310 320 330 340 350 360 RREAVEYARR VVEFWAPHVD GFRLDVAHGI PPEAWRAALE PARGRYVFGE HVGNPAPFYH 370 380 390 400 410 420 VIRGFTAYFL YHHGVKRLGE GVEEVARGVN RYLALTPPSA VPHMNLFLEN HDLDRAASFL 430 440 450 460 470 480 SPDAVVMGYA LIYSLPGVPS VYMGGECGEV GRAEDHTNRR PFPGCGGHPL KSFLAKLFAA 490 500 510 520 RKRLGLSAGP AYAYTRRGRL VLWRGDVEVE VERGRAVFTS PGGSLEIFI

References

[1]

"Complete sequence of Pyrobaculum calidifontis JCM 11548." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Cozen A.E., Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCM 11548 / VA1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000561 Genomic DNA. Translation: ABO07659.1.
RefSeq	YP_001055125.1. NC_009073.1.
3D structure databases
ProteinModelPortal	A3MSP2.
ModBase	Search...
Protein-protein interaction databases
STRING	A3MSP2.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4909967.
GenomeReviews	Gene locus Pcal_0222 in contig CP000561_GR.
KEGG	pcl:Pcal_0222.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04723.
HOGENOM	HBG646032.
OMA	AMSYHRY.
ProtClustDB	CLSK631191.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3MSP2_PYRCJ

Accession

Primary (citable) accession number: A3MSP2

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	October 19, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)