A3M0F1 (A3M0F1_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isoleucine-tRNA ligase EMBL ABN68697.2
EC=6.1.1.5 EMBL ABN68697.2

Gene names

Name:	ISM1 EMBL ABN68697.2
ORF Names:	PICST_63933 EMBL ABN68697.2

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome]

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces

Protein attributes

Sequence length	983 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Ligase EMBL ABN68697.2
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	isoleucyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro isoleucine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3M0F1 [UniParc]. Last modified July 24, 2007. Version 2. Checksum: DC91D9A1D4893F18	FASTA	983	112,383
	10 20 30 40 50 60 MLRCIGSVRS LSTGPRCLQK VNYSNTLHLP KTSFGPKIPK NEARDELIKT TSQDLYEWQV 70 80 90 100 110 120 KNKENRPSFT LHDGPPYANG DLHLGHALNK ILKDIINRFE LIHNNSVINY RPGWDCHEPT 130 140 150 160 170 180 LESATKLSAS EIRAACRQLA NKEIDSQRNQ FKEFAIMADF DNPYITMSHD YEINQLRVFK 190 200 210 220 230 240 KLMENGLLSR QLKPVWWGCE TETALAEAEL EYNNDHKSVA IHVKFPVVSS VIYQTLRDNF 250 260 270 280 290 300 KIGVNEQDLN LKLLIWTSTP WTIPANRAVC VNNDLDYTLV HNKITNEYLF VGVPLVNEVL 310 320 330 340 350 360 ALNDNFESVG ESVIFRGNDL VGLEYINPAS KDGVHHPVIH GSHVVSSAGS GLVHTAPAHG 370 380 390 400 410 420 GEDFIIGKNH GLDVRSSVNG QGRYIADNIP VGFHSLAKHK VTDSETIRKC IGILDENGMI 430 440 450 460 470 480 FNINKTFKHS YPYDWRSKTP VIQRSTPQWF VNVEKIKPTA IEALEKVKFY PESGKNRLPS 490 500 510 520 530 540 FIRNRNEWCI SRQRTWGVPL PIVYNRNSGE PVEDIETVDY IIHRMDEFGT DEWFSSEDDI 550 560 570 580 590 600 SRWLPEEYKS SGKEYVKGQD TMDVWFDSGT SWTTLNKDIE SSFRSETPLA NIYLEGSDQH 610 620 630 640 650 660 RGWFQSSLLN KIIASGVNGN DFLPVAPFTK IITHGFTLDS KNEKMSKSKG NIISPRHAIE 670 680 690 700 710 720 GGGKPLLPAL GTDGLRLWVA SSNYNADVSV GSEVLSRVFE NMKKLRVTFK YLLGNLNDFR 730 740 750 760 770 780 EPVDYNNLNP LDKYALSKLY KLETSCIEHY KEHNFSRVVS EVNHHMNVIL SSLYFDISKD 790 800 810 820 830 840 CLYTDSKNSV RRRSIQTVLK EILRVYIGLL APIQPILTQE VWEEYRRFFD VKESSPFMVG 850 860 870 880 890 900 GWHNFYKLQD QFLNEQIESE FQLIWELRDQ VYKQMEQLRL DGIYKNKLET QVNIAFNGEK 910 920 930 940 950 960 TKLEDILRAH ALFLDDYFLV SKATVGQLEA DPKYESKTTV EVNGESVNIQ ISPSPGAKCP 970 980 RCWKFTSVVE DKLCQKCDTV VNH

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000502 Genomic DNA. Translation: ABN68697.2.
RefSeq	XP_001386726.2. XM_001386689.1.
3D structure databases
ProteinModelPortal	A3M0F1.
ModBase	Search...
Protein-protein interaction databases
STRING	A3M0F1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4841139.
GenomeReviews	Gene locus ISM1 in contig CP000502_GR.
KEGG	pic:PICST_63933.
Phylogenomic databases
eggNOG	fuNOG05498.
HOGENOM	HBG577712.
OMA	KQVLTHG.
OrthoDB	EOG40S3PR.
Family and domain databases
HAMAP	MF_02002. Ile_tRNA_synth_type1. [Tree]
InterPro	IPR001412. aa-tRNA-synth_I_CS. IPR002300. aa-tRNA-synth_Ia. IPR002301. Ile-tRNA-synt. IPR023585. Ile-tRNA-synt_type1. IPR014729. Rossmann-like_a/b/a_fold. IPR009080. tRNAsynth_1a_anticodon-bd. IPR013155. V/L/I-tRNA-synth_anticodon-bd. IPR009008. Val/Leu/Ile-tRNA-synth_edit. [Graphical view]
Gene3D	G3DSA:3.90.740.10. G3DSA:3.90.740.10. 1 hit. G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 2 hits.
KO	K01870.
PANTHER	PTHR11946:SF9. Ile-tRNA-synt_Ia. 1 hit.
Pfam	PF08264. Anticodon_1. 1 hit. PF00133. tRNA-synt_1. 1 hit. [Graphical view]
PRINTS	PR00984. TRNASYNTHILE.
SUPFAM	SSF47323. tRNAsyn_1a_bind. 1 hit. SSF50677. ValRS_IleRS_edit. 1 hit.
TIGRFAMs	TIGR00392. IleS. 1 hit.
PROSITE	PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3M0F1_PICST

Accession

Primary (citable) accession number: A3M0F1

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	July 24, 2007
Last modified:	December 14, 2011
This is version 45 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)