A3LYM2 (A3LYM2_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyruvate dehydrogenase E1 component, beta subunit (PDH) EMBL ABN68196.1
EC=1.2.4.1 EMBL ABN68196.1

Gene names

Name:	PDB1 EMBL ABN68196.1
ORF Names:	PICST_68238 EMBL ABN68196.1

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome]

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces

Protein attributes

Sequence length	389 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Pyruvate EMBL ABN68196.1
Molecular function	Oxidoreductase EMBL ABN68196.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	pyruvate dehydrogenase (acetyl-transferring) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3LYM2 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: B65E9AA005686F24	FASTA	389	41,905
	10 20 30 40 50 60 MAPKLSQIAQ TARLAASATR AHNIANVTGN TTRSVAQAGQ YQALRMMDSR AASSSAVGSK 70 80 90 100 110 120 TITVRDALNA GLAEELDKDD DVFLMGEEVA QYNGAYKVSR GLLDRFGERR VIDTPITEMG 130 140 150 160 170 180 FTGLAVGAAL HGLKPVLEFM TFNFAMQAID QIVNSAAKTY YMSGGKQPCN ITFRGPNGAA 190 200 210 220 230 240 AGVGAQHSQC YAAWYGSIPG LKVVSPYSAE DYKGLIKAAI RDPNPVVFLE NEIAYGETFD 250 260 270 280 290 300 ISEEALSTDF VLPIGKANVE REGTDLTFVS HSRSVKFCME AAETLEKEYG VKAEVINLRS 310 320 330 340 350 360 IKPLDVPTIV ESVKKTNHLV TVEAGFPAFG VGSEICAQIM ESEAFDYLDA PVERVTGCEV 370 380 PTPYAKELED FAFPDEPTVI RAAKKVLSL

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000501 Genomic DNA. Translation: ABN68196.1.
RefSeq	XP_001386225.1. XM_001386188.1.
3D structure databases
ProteinModelPortal	A3LYM2.
SMR	A3LYM2. Positions 59-389.
ModBase	Search...
Protein-protein interaction databases
STRING	A3LYM2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4840587.
GenomeReviews	Gene locus PDB1 in contig CP000501_GR.
KEGG	pic:PICST_68238.
Phylogenomic databases
eggNOG	fuNOG05078.
HOGENOM	HBG753264.
OMA	MEHAFDY.
OrthoDB	EOG42RHGZ.
Family and domain databases
InterPro	IPR009014. Transketo_C/Pyr-ferredox_oxred. IPR015941. Transketolase-like_C. IPR005475. Transketolase-like_Pyr-bd. IPR005476. Transketolase_C. [Graphical view]
Gene3D	G3DSA:3.40.50.920. Transketo_C_like. 1 hit.
KO	K00162.
Pfam	PF02779. Transket_pyr. 1 hit. PF02780. Transketolase_C. 1 hit. [Graphical view]
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAM	SSF52922. Transketo_C_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3LYM2_PICST

Accession

Primary (citable) accession number: A3LYM2

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)