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Protein
Submitted name:

Snf family helicase

Gene

SWR1

Organism
Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Snf family helicaseImported
Gene namesi
Name:SWR1Imported
ORF Names:PICST_62265Imported
OrganismiScheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)Imported
Taxonomic identifieri322104 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeScheffersomyces
Proteomesi
  • UP000002258 Componenti: Chromosome 6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi322104.XP_001385659.2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini335 – 407HSAInterPro annotationAdd BLAST73
Domaini746 – 911Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1284 – 1437Helicase C-terminalInterPro annotationAdd BLAST154

Phylogenomic databases

eggNOGiKOG0388. Eukaryota.
KOG0391. Eukaryota.
COG0553. LUCA.
HOGENOMiHOG000186095.
InParanoidiA3LYG2.
KOiK11681.
OMAiYFLMPSS.
OrthoDBiEOG092C1YH4.

Family and domain databases

InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.

Sequencei

Sequence statusi: Fragment.

A3LYG2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SKSEKLARII TNFNLSVNEL FHLREYQSIV SWNPSDFSTA IPGHQIPELF
60 70 80 90 100
EIFTQDAANQ IEWDANVEDL SSIPLRLQKK VLAEREKKLL LKYPFKNDVI
110 120 130 140 150
DMSKQLEREI ISRALEEPEG ETHTTTKSNG SVPKPQKQAN GHSKTLKSKK
160 170 180 190 200
KVKQKRIDEQ EVDVEIEDEE EDPDDEINTN YRLKAVKYTI APPLVTHPSH
210 220 230 240 250
IPAWRPEISN ADGIQDGSEE HQILEFNPEP ITVVKNRDGN IVAPNITSKL
260 270 280 290 300
HNYLESNYKV AIVDDSNVDY NNTAEEFEVV TAQQENMLKE IYHKCTIDNS
310 320 330 340 350
LELNGDKIER RKIVLPQASN LRQTSDPFRN TATVTPKVQG STNNLTHHDY
360 370 380 390 400
LLNQGISFAK LHQQMRKQHS SRTKRIAQMV DQYFKRKNGE KDRLAREREL
410 420 430 440 450
NLKKLSRLAA QAVKKRWTQA NKVYSIIQQQ KEDELKQIQG REHLSQMLEH
460 470 480 490 500
STQLLEAQFN KSSREATTEP EFDSDSESVL SNSDENFSTS DESEQENSDT
510 520 530 540 550
ERVTRAKDGD MSLSVEELKQ KYSTLQESVE PTSSAPSDRD NDSDDDSEEE
560 570 580 590 600
EDGIVVSQGL SALYGGSELS ASATPQLADV EYTEEQKKLI EELNTEARED
610 620 630 640 650
PALNSDSESS GFSSEDENES GSDESETVEE DDEEEEKDVP DKKENGYVSN
660 670 680 690 700
LGSLFNGRND ASEEEEEGSY SESDGKTSED EMMSTTDEES DVVENGDIPM
710 720 730 740 750
EDEVKQETEE GALQEINGAK VKDVPLPSLL RGTLRPYQKQ GLNWLASLYN
760 770 780 790 800
NDTNGILADE MGLGKTIQTI SLLSYLACEH HIWGPHLIVV PTSVMLNWEM
810 820 830 840 850
EFKKFAPGFK VMTYYGSPQQ RAQKRKGWNN PDTFHVCITS YQLVVQDQQS
860 870 880 890 900
FKRRKWRYMI LDEAHNIKNF RSTRWRALLN FNTENRLLLT GTPLQNNLME
910 920 930 940 950
LWSLLYFLMP SSKVNQAMPE GFANLDDFQT WFGRPVDKIL EQTSATSTSD
960 970 980 990 1000
IVDENEKTTH RLDDETRNTV ARLHQVLRPY LLRRLKKDVE KQMPGKYEHI
1010 1020 1030 1040 1050
VYCRLSKRQR FLYDDFMSRA KTKETLASGN FLSIINCLMQ LRKVCNHPDL
1060 1070 1080 1090 1100
FEVRPIVTSL SMPRSVCNSF SSSAALIRKE LTDENLMKGI NFNVLNLDIT
1110 1120 1130 1140 1150
NSDNLNYFVS QSASKLKSSK ELDAQIQKLS NLVPSELGDV PDVSDYLKYY
1160 1170 1180 1190 1200
QYIKTCEQIE VRDKLKHILY LNSLRCSRSP IYGESLLRFL TKEKKKEDSD
1210 1220 1230 1240 1250
LYDNLFLSVN DRVRVLGDVI EKFSVITPAV VALDMKDQII PLSTQRRIMD
1260 1270 1280 1290 1300
EVANNQIENP FHKSQTKLSI AFPDKSLLQY DCGKLQKLAK LLQNLTAGGH
1310 1320 1330 1340 1350
RALIFTQMTK VLDILEQFLN IHGYRYSRLD GATKIEDRQL LTEKFNRDPK
1360 1370 1380 1390 1400
ISVFILSTRS GGLGINLTGA DTVIFYDSDW NPAMDKQCQD RCHRIGQSRD
1410 1420 1430 1440 1450
VHIYRFVSEY TIESNILKKA NQKRQLDNVV IQEGEFTTDY FGKFSVRDLV
1460 1470 1480 1490 1500
NDTTIADQIP DRELDFTGDA KMEKAFAQVE DEDDRTAANE AMKEVAVDDE
1510 1520 1530 1540 1550
DFDEESKSAT TGGTPAQTPV GVPAVKQDEP VDVDYEEGIG HIDEYMLRFI

ADGYYND
Length:1,557
Mass (Da):177,860
Last modified:July 24, 2007 - v2
Checksum:i603A932F2D0012A2
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000500 Genomic DNA. Translation: ABN67630.2.
RefSeqiXP_001385659.2. XM_001385622.1.

Genome annotation databases

EnsemblFungiiABN67630; ABN67630; PICST_62265.
GeneIDi4840164.
KEGGipic:PICST_62265.

Entry informationi

Entry nameiA3LYG2_PICST
AccessioniPrimary (citable) accession number: A3LYG2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: July 24, 2007
Last modified: June 7, 2017
This is version 57 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported