A3LY69 (A3LY69_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase) (AsnRS) EMBL ABN67583.2
EC=6.1.1.22 EMBL ABN67583.2

Gene names

Name:	SYN3 EMBL ABN67583.2
ORF Names:	PICST_33068 EMBL ABN67583.2

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome]

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces

Protein attributes

Sequence length	553 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL ABN67583.2 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: EC nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3LY69 [UniParc]. Last modified July 24, 2007. Version 2. Checksum: FB673E3563415F03	FASTA	553	62,246
	10 20 30 40 50 60 MSKVYVNEKA GTDDSAAGFG TEEKPFLTPA YASYSSPEAT IYLYKQVEES EEFAYVEISA 70 80 90 100 110 120 SALKKAKKGA DGIKKKLEKQ AKAAEEQAKK AEEQAKKLAE LDLIKIVEDE KLPAAKKIKL 130 140 150 160 170 180 RAIQENLETR VAVQGWVHRL RLQKGVAFIT LRDGTGFIQA VLSGDLAKAR QTQELTIEST 190 200 210 220 230 240 VVIKGVISKL PEGKSAPGGV ELKADYYEVV GLAPSGDESF TNKAPENSDP SLLLDQRHLT 250 260 270 280 290 300 LRGETLSAVM KVRASLLRAI RRFFAEEGLL EVTPPCMVQT QVEGGSTLFK MDYYGEEAYL 310 320 330 340 350 360 TQSSQLYLET CLPALGDVYC VQESFRAEKS HTRRHLSEYT HIESELAFIE FDDLLSHLER 370 380 390 400 410 420 LITKTVQYVL EDEVAGPLIK QLNPDFQPPK TPFLRMEYIH ALEWLNEHGI PNEEGEKFKF 430 440 450 460 470 480 GDDIAEAAER KMTDTIGTPI LLIRFPVEIK SFYMQKCKDD PRVTESVDVL MPNVGEITGG 490 500 510 520 530 540 SMRTYDYDEL IAAIKREKLD LDSYYWFTDQ RKYGTCPHGG YGLGTERILA WLCDRFTVRD 550 CSLYPRFTGR CKP

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000500 Genomic DNA. Translation: ABN67583.2.
RefSeq	XP_001385612.2. XM_001385575.1.
3D structure databases
ProteinModelPortal	A3LY69.
ModBase	Search...
Protein-protein interaction databases
STRING	A3LY69.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4840247.
GenomeReviews	Gene locus SYN3 in contig CP000500_GR.
KEGG	pic:PICST_33068.
Phylogenomic databases
eggNOG	fuNOG07411.
HOGENOM	HBG745843.
OMA	CMVQTQV.
OrthoDB	EOG47WRX6.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01893.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF6. PTHR22594:SF6. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. AsnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3LY69_PICST

Accession

Primary (citable) accession number: A3LY69

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	July 24, 2007
Last modified:	November 16, 2011
This is version 43 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)