A3LY66 (A3LY66_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Asparaginyl-tRNA synthetase EMBL ABN67926.2

Gene names

Name:	SYN4 EMBL ABN67926.2
ORF Names:	PICST_84563 EMBL ABN67926.2

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome]

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces

Protein attributes

Sequence length	511 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL ABN67926.2 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3LY66 [UniParc]. Last modified July 24, 2007. Version 2. Checksum: FFEFE6BA699E0806	FASTA	511	58,184
	10 20 30 40 50 60 MNQLFKTSRQ YRRLPIFRSI FHSQKYFSSL TPTIKDLLAN PPSPDSTILA QGHIKSIRQG 70 80 90 100 110 120 KSAGFIDLSD GSAHLSLNVI VKNPLEVLSK LQLKVGQSIQ VQGKWVESQG TQDYEIVYNF 130 140 150 160 170 180 EDVAHSLRVV GDVSEQYPIQ KKSSSYQFLR NHPTLRHRTS TLASLLRFRS FVESSLFEFF 190 200 210 220 230 240 NGNSFTKVVP PLITSSDCEG AGEQFSVESL SKLNESRNKT TLSSEDHFFG KSTYLTVSTQ 250 260 270 280 290 300 LHLEVLALSL NRVWTLTPCF RAEDSNTNRH LSEFWMLEAE ICYLGDLNQL TSFTEDMIRH 310 320 330 340 350 360 VANSLKQSCN DSSISGGAVD LLGSRFNKED VELMKNRWDT VLSEASWPSI TYTEAVEIIN 370 380 390 400 410 420 RVMNKGRSKN RLQWGDSIQT PHEKWLAGEY FKSPVFITDY PTAEKPFYMP KSKNFDPQRP 430 440 450 460 470 480 TVACYDLILP EIGELVGGSM REHNYNNLVE EMKNRNMNLD EMQWYLSTRE NGTVPHGGFG 490 500 510 MGFERLIAYL SGMENVKEVI PFPRVPQSCH C

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000500 Genomic DNA. Translation: ABN67926.2.
RefSeq	XP_001385955.2. XM_001385918.1.
3D structure databases
ProteinModelPortal	A3LY66.
ModBase	Search...
Protein-protein interaction databases
STRING	A3LY66.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4839813.
GenomeReviews	Gene locus SYN4 in contig CP000500_GR.
KEGG	pic:PICST_84563.
Phylogenomic databases
eggNOG	fuNOG05389.
HOGENOM	HBG745843.
OMA	RHILENC.
OrthoDB	EOG45F0Z6.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01893.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF6. PTHR22594:SF6. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. AsnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3LY66_PICST

Accession

Primary (citable) accession number: A3LY66

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	July 24, 2007
Last modified:	November 16, 2011
This is version 43 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)