Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A3LWY2 (GSM1_PICST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glucose starvation modulator protein 1
Gene names
Name:GSM1
Synonyms:HBR1
ORF Names:PICST_68007
OrganismScheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome]
Taxonomic identifier322104 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeScheffersomyces

Protein attributes

Sequence length520 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Transcription factor which regulates nonfermentable carbon utilization By similarity.

Subcellular location

Nucleus By similarity.

Sequence similarities

Belongs to the ERT1/acuK family.

Contains 1 PAS (PER-ARNT-SIM) domain.

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 520520Glucose starvation modulator protein 1
PRO_0000406490

Regions

Domain376 – 44570PAS
DNA binding20 – 4829Zn(2)-C6 fungal-type
Compositional bias124 – 1274Poly-Gln

Sequences

Sequence LengthMass (Da)Tools
A3LWY2 [UniParc].

Last modified July 24, 2007. Version 2.
Checksum: FD562E539C5211CE

FASTA52059,472
        10         20         30         40         50         60 
MTKRLSPHEK KNRKPASRAC VFCHEKHLQC SNERPCKNCV KRGLAHECRD VIRKRAKYLN 

        70         80         90        100        110        120 
TNSRRGSEAQ AHADYPHNPI DGFMSPTIKP EIPSPASNMV VSPQFVGNAL LQQEVQHPQQ 

       130        140        150        160        170        180 
FHPQQQQKLS LHNSMLNTTN DVLNRLLEEQ NFKDTDSDNM SANSVNASRP NTAIGTGTFS 

       190        200        210        220        230        240 
SNYLNEEYLM LGDIILHSKP TSPSPSNTSV SEYNTNTVSP NFSSQINYDD LNQPRRKVLQ 

       250        260        270        280        290        300 
RLKDSRPFIS LGFSNESSQL PNLNSSNIAQ SSSIPTEYVS PLVTHHLYQS VQDIYTNNIM 

       310        320        330        340        350        360 
NFDYPQSYHS LTHFLKKRFS GNNLPAEQKQ AKRQSLLVIL KLIASYRPTF ISAHKSLLKP 

       370        380        390        400        410        420 
YDLQFLEMTF QRCLIDYEKL SQLNSSPTII WRRTGEIVSI TDDLLSLLGY NLADLLSHRT 

       430        440        450        460        470        480 
FIMELMYDDE SITNYFRLFK TVAVGNLHSS IITKIKLTKN QNRNVSDQTG TRRLSYELSE 

       490        500        510        520 
RDHIEFCSVW TVKRDMFDLP MMIIGQFLPI LPAGDGVRMY 

« Hide

References

[1]"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis."
Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M.
Nat. Biotechnol. 25:319-326(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000500 Genomic DNA. Translation: ABN67713.2.
RefSeqXP_001385742.2. XM_001385705.1.

3D structure databases

ProteinModelPortalA3LWY2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4924.PICST_68007.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4840334.
KEGGpic:PICST_68007.

Phylogenomic databases

eggNOGNOG48118.
HOGENOMHOG000248519.
OMAFIMELMY.
OrthoDBEOG70KGZB.

Family and domain databases

Gene3D4.10.240.10. 1 hit.
InterProIPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamPF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTSM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMSSF57701. SSF57701. 1 hit.
PROSITEPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGSM1_PICST
AccessionPrimary (citable) accession number: A3LWY2
Entry history
Integrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: July 24, 2007
Last modified: April 16, 2014
This is version 44 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families