A3LWT3 (A3LWT3_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL ABN67694.1

Gene names

ORF Names:

PICST_48387 EMBL ABN67694.1

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome]

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces

Protein attributes

Sequence length	250 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1
Sequence similarities	Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
Ligand	Pyridoxal phosphate PIRSR PIRSR004848-1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	46	1	N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

	Sequence		Length	Mass (Da)
	A3LWT3 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: BE26BEBB254E0723	FASTA	250	27,770
	10 20 30 40 50 60 MSSAFLQVSA KRQRELVANY NTVLEQVQSL AKKHSNVPVR LVAVSKLKPS GDIMALYNAG 70 80 90 100 110 120 VRHFGENYVQ ELIGKSKELP KDIKWHFIGG MQSGKAKDLA KGVESLFAVE TIDALKKCKQ 130 140 150 160 170 180 LDNTRSRLDG APIEVYLQIN TSEEDQKSGY SLSNLTELYE TIDYILSDEC KKLKLGGLMT 190 200 210 220 230 240 IGSFAESHTD GEENEDFSKL VNLKKIVDEK YKLNLQLSMG MSSDFEQAIK QGSTSVRVGT 250 SIFGARPPRI

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000500 Genomic DNA. Translation: ABN67694.1.
RefSeq	XP_001385723.1. XM_001385686.1.
3D structure databases
ProteinModelPortal	A3LWT3.
SMR	A3LWT3. Positions 9-244.
ModBase	Search...
Protein-protein interaction databases
STRING	A3LWT3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4840107.
KEGG	pic:PICST_48387.
Phylogenomic databases
eggNOG	fuNOG07990.
HOGENOM	HBG289671.
OMA	DFQHAVS.
OrthoDB	EOG4QRMDH.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3LWT3_PICST

Accession

Primary (citable) accession number: A3LWT3

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)