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Protein
Submitted name:

Uncharacterized protein

Gene

PICST_72313

Organism
Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:PICST_72313Imported
OrganismiScheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)Imported
Taxonomic identifieri322104 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeScheffersomyces
Proteomesi
  • UP000002258 Componenti: Chromosome 5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei159 – 179HelicalSequence analysisAdd BLAST21
Transmembranei185 – 206HelicalSequence analysisAdd BLAST22
Transmembranei218 – 234HelicalSequence analysisAdd BLAST17
Transmembranei273 – 294HelicalSequence analysisAdd BLAST22
Transmembranei598 – 622HelicalSequence analysisAdd BLAST25
Transmembranei643 – 664HelicalSequence analysisAdd BLAST22
Transmembranei670 – 691HelicalSequence analysisAdd BLAST22
Transmembranei712 – 729HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi322104.XP_001385245.2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini326 – 392MIRInterPro annotationAdd BLAST67
Domaini399 – 458MIRInterPro annotationAdd BLAST60
Domaini469 – 526MIRInterPro annotationAdd BLAST58

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3359. Eukaryota.
COG1928. LUCA.
HOGENOMiHOG000157526.
InParanoidiA3LW31.
KOiK00728.
OMAiWWIVKDP.
OrthoDBiEOG092C0JF4.

Family and domain databases

InterProiView protein in InterPro
IPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
IPR036300. MIR_dom_sf.
IPR016093. MIR_motif.
IPR032421. PMT_4TMC.
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiView protein in Pfam
PF02815. MIR. 1 hit.
PF02366. PMT. 1 hit.
PF16192. PMT_4TMC. 1 hit.
SMARTiView protein in SMART
SM00472. MIR. 3 hits.
SUPFAMiSSF82109. SSF82109. 1 hit.
PROSITEiView protein in PROSITE
PS50919. MIR. 3 hits.

Sequencei

Sequence statusi: Complete.

A3LW31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSTLRKRGP KKGQNAVGNS AAQEDDDLKK LRELEEEARG FKEPEYKYQV
60 70 80 90 100
ALAAITILAA YTRFYHISIP DKVVFDEVHF GKFASYYLER TYFFDLHPPF
110 120 130 140 150
AKLLIAFAGW LIRYDGAFKF ENIGDSYITN KVPYIPLRAL SAIQGTLTVP
160 170 180 190 200
VMFLTMKTLG FSVAGCLFAA LIVCFDNAHV ADSRLILLDA TLIFAVALTI
210 220 230 240 250
YAYSKFSTYR KQPFSQKWWT WLTATGVSLS LVISTKYVGV FTYVTIGIAV
260 270 280 290 300
IHELWILLDY QKGLTIPEFS KHFAARLWSL IIMPFIIYLF WFYVHFAILT
310 320 330 340 350
KSGPGDNFMS AEFQETLLES PMAKLSKNVH YNDLITIKHK DTDAFLHSHL
360 370 380 390 400
HSYPLRYEDG RVSSNTQQVT CVFDPDSKEA EDVNNHWEIV PSSKDVARGT
410 420 430 440 450
DVYTNDVVRF RHVGTGGYLL AHDVASPLKA THEEFTIAYG EDAAVTKFNE
460 470 480 490 500
TLFRLRFGGS GSTKNKNKRR VIKTKGTPLR IIHVDTVVAM WTHDDEVLPE
510 520 530 540 550
WGFGHQEVSG NKKTQDSDNV WTIDDIVDMD PIDPRSKYVP KQVKTLSFFK
560 570 580 590 600
KWWELQGLMF KHNNQLSSEH PFASQPETWP LALSGVSFYN DNDNRRQIFF
610 620 630 640 650
TGNIIGFWLE VCFLSIYLGL LLADQVTRRR HVYILSDRAR SKLYNTLGFL
660 670 680 690 700
FAGWGAHFFP FFLMNRQKFL HHYLPAHLLA ALFSGGLVDF ISSNNIRDSN
710 720 730 740 750
GRPTVYNKIK STVIVTGCSI GIVWFFFYFR PITYGDTTLS VEEVKARQWL

DIKLHYAK
Length:758
Mass (Da):86,815
Last modified:July 24, 2007 - v2
Checksum:iF1A09B84D5BD7DC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000499 Genomic DNA. Translation: ABN67216.2.
RefSeqiXP_001385245.2. XM_001385208.1.

Genome annotation databases

EnsemblFungiiABN67216; ABN67216; PICST_72313.
GeneIDi4839332.
KEGGipic:PICST_72313.

Similar proteinsi

Entry informationi

Entry nameiA3LW31_PICST
AccessioniPrimary (citable) accession number: A3LW31
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: July 24, 2007
Last modified: October 25, 2017
This is version 62 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported