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A3LRL8 (A3LRL8_PICST) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain EMBL ABN65407.1
Gene names
Name:CTF1 EMBL ABN65407.1
ORF Names:PICST_57681 EMBL ABN65407.1
OrganismScheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome] EMBL ABN65407.1
Taxonomic identifier322104 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces ›

Protein attributes

Sequence length852 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain. SAAS SAAS007219

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL ABN65407.1

Sequences

Sequence LengthMass (Da)Tools
A3LRL8 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: B22C79DF24D01FA9

FASTA85295,555
        10         20         30         40         50         60 
EKPKAFTIKY KRPRGSRACT VCRSRKVRCD AEIHIPCTNC ITFGCDCVLP EVKKRGNSSQ 

        70         80         90        100        110        120 
DSKPKRRQTV SISSKDKITV NDEHDHSSAS DINNGSNSQP SASLEKPSDT SSSATSGASS 

       130        140        150        160        170        180 
NEPILNISSV SIPPSLTSTY KTRPSIHKRE LVSSNNRAAL TFLGSSSVGV VVQRVGENHV 

       190        200        210        220        230        240 
QLTSDIYDFT DNSMDAVELE ILKLRGAFLL PSFELQLDLI NSYFEHVHPL MPVLNRTQFM 

       250        260        270        280        290        300 
YKFNDPNDNP SLMLLQAVLL CGCRVSRNPL LFDSKGSSDL AALTFFRRAK SLYEANYESD 

       310        320        330        340        350        360 
PVSVVQTLIL IGSYWEGPED VTKNSFYWTR VAVGLAQGFG FQRDVNNSKN LTTSEKKIWR 

       370        380        390        400        410        420 
RIWWCLFEKD RNVAIAFGRP SVIDLNDCDV PMLTLDDFNE DDPELEIKSP YPVNETEALY 

       430        440        450        460        470        480 
FIHLVKLAEI TGIIIRHQYS VKSEQLKRKN KFSIIQHCDM LMGIWFTNLP PQLVFSLTDQ 

       490        500        510        520        530        540 
STQNFYSCLL NAQYYNRLYL IHRSNLIRMA KSSSTDPNNY KYPSWGISFQ SARMISIISK 

       550        560        570        580        590        600 
ILLDGDQIKY CPVMYVYIAF SALVMLIYHV DSSNSVIAST ASDSLFVSRA VLRELAGYWP 

       610        620        630        640        650        660 
VAGVLMKFFD KYANDKIKRA KVIENGTRIA EFQELHANQN DQKNGKGYFE HVSNNNAAIK 

       670        680        690        700        710        720 
KEGPYLTGNS PSGVSATSGV SPGGEIYNDY QKAQYKNPNI DELVQQYKQK DTSAQKLQKD 

       730        740        750        760        770        780 
KTVDTSPASS TQSFPNISLV TEKLPANHNF FENFEPTQLF PDIRYSYPPT RVHSPSAEAS 

       790        800        810        820        830        840 
AEPIGSNVYA NVRHRPTNDG SDVVDEAYPS TTPGASSYTN FIDSSFINMN LQSGIENSSL 

       850 
TDDIASLFNL KY

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References

[1]"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis."
Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M.
Nat. Biotechnol. 25:319-326(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000497 Genomic DNA. Translation: ABN65407.1.
RefSeqXP_001383436.1. XM_001383399.1.

3D structure databases

ProteinModelPortalA3LRL8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4837996.
KEGGpic:PICST_57681.

Phylogenomic databases

HOGENOMHOG000093589.
OMANLIRMAK.
OrthoDBEOG4SN4WT.

Family and domain databases

Gene3D4.10.240.10. 1 hit.
InterProIPR007219. Transcription_factor_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMSSF57701. Fungi_TrN. 1 hit.
PROSITEPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3LRL8_PICST
AccessionPrimary (citable) accession number: A3LRL8
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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