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A3LNF2 (A3LNF2_PICST) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length579 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A3LNF2 [UniParc].

Last modified July 24, 2007. Version 2.
Checksum: 42C07E46ECB31004

FASTA57963,080
        10         20         30         40         50         60 
MSRAISSTQV LIGTEVVPGT VIFSIESGKI LYIESGKQLE VDDPLLELYN VLPVDHRDVS 

        70         80         90        100        110        120 
PLVVMPGLVD AHVHLNEPGR TEWEGFATGT KAAAAGGVTT VIDMPLNAIP PTTTIANFNL 

       130        140        150        160        170        180 
KIDAAKDQTW VDVGFWGGLV PDNLHHLRPL ISMGVRGFKG FMIESGVDEF PAIDPSYIVK 

       190        200        210        220        230        240 
AMERVEGQKT VLMFHAEMQP VEPLSGDIES ISLGMSASFI QRAPKPVVEL LSMDGSGNCQ 

       250        260        270        280        290        300 
EEHENCHLPH NHAGSIDHKV LSDAQATALA KSPILAAVEP TFGKFARKAN HFDSPFFRAV 

       310        320        330        340        350        360 
EEKPLDSPLL IAQSEDALLE DIDPTAYASF LASRPDNFET TAIAEIINCS TKFPTVPLHI 

       370        380        390        400        410        420 
VHLATHEAVP LIRAAKAKGL PITAETCFHY LSLYAESIAN CSTHFKCCPP IRTNDNRKLL 

       430        440        450        460        470        480 
WRALRNDIIT TVVSDHSPCT PDLKGLEKGD FFEAWGGISS VGFGLPILYT EGKKLSPPIT 

       490        500        510        520        530        540 
FAEINKWCSL NTAKQVGLSH RKGKLAVGYD ADLLVFDPND KYIVQNQDTY FKNKLTAYAG 

       550        560        570 
KEFSGRVIET IVGGNSVYAF GKGHSDVPMG KLILEPRFA 

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References

[1]"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis."
Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M.
Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000496 Genomic DNA. Translation: ABN64845.2.
RefSeqXP_001382874.2. XM_001382837.1.

3D structure databases

ProteinModelPortalA3LNF2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3LNF2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4836964.
GenomeReviewsGene locus ALN1 in contig CP000496_GR.
KEGGpic:PICST_34891.

Phylogenomic databases

eggNOGfuNOG07633.
HOGENOMHBG724623.
OMAFHAEVEC.
OrthoDBEOG4HQHT4.

Family and domain databases

InterProIPR006680. Amidohydro_1.
IPR002195. Dihydroorotase_CS.
IPR018228. DNase_TatD-rel_CS.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
KOK01466.
PfamPF01979. Amidohydro_1. 2 hits.
[Graphical view]
SUPFAMSSF51338. Metalo_hydrolase. 1 hit.
PROSITEPS00482. DIHYDROOROTASE_1. 1 hit.
PS01137. TATD_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3LNF2_PICST
AccessionPrimary (citable) accession number: A3LNF2
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: July 24, 2007
Last modified: January 25, 2012
This is version 42 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)