A3LN97 (A3LN97_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL ABN64293.2

Gene names

ORF Names:

PICST_54024 EMBL ABN64293.2

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome] EMBL ABN64293.2

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces

Protein attributes

Sequence length	340 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure

Homooctamer By similarity. PIRSR PIRSR001415-3

Ontologies

Keywords
Ligand	Metal-binding PIRSR PIRSR001415-3 Zinc PIRSR PIRSR001415-3
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	porphyrin-containing compound biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW porphobilinogen synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	211	1	Schiff-base intermediate with substrate By similarity PIRSR PIRSR001415-1
	Active site	264	1	Schiff-base intermediate with substrate By similarity PIRSR PIRSR001415-1
	Metal binding	134	1	Zinc; catalytic By similarity PIRSR PIRSR001415-3
	Metal binding	136	1	Zinc; catalytic By similarity PIRSR PIRSR001415-3
	Metal binding	144	1	Zinc; catalytic By similarity PIRSR PIRSR001415-3
	Binding site	221	1	Substrate 1 By similarity PIRSR PIRSR001415-2
	Binding site	233	1	Substrate 1 By similarity PIRSR PIRSR001415-2
	Binding site	291	1	Substrate 2 By similarity PIRSR PIRSR001415-2
	Binding site	330	1	Substrate 2 By similarity PIRSR PIRSR001415-2

Sequences

	Sequence		Length	Mass (Da)
	A3LN97 [UniParc]. Last modified July 24, 2007. Version 2. Checksum: 567F58107757FBE0	FASTA	340	37,028
	10 20 30 40 50 60 MVHTAEYLPE TGTKIGSVLQ GGYNHPLARE WQSEKQLTKN MFIFPLFVSD EPDEETEIPA 70 80 90 100 110 120 LPNIKRYGLN KLIPYVKTLV DKGLRAVILF GVPLKEGVKD EVGTAADDPE GPVILSIKAL 130 140 150 160 170 180 KKNFPDLYVM CDVCLCEYTS HGHCGVLYED GSLNRETSAL RIGAVAVNYA KAGANCVAPS 190 200 210 220 230 240 DMVDGRIKDI KVGLIDAGLA HKCLVMSYAA KFSGNLYGPF RDAAGSAPSH GDRKAYQLPP 250 260 270 280 290 300 GGAGLARRAL LRDMEEGADA VIVKPSTFYL DIISDASRLC HDYPICAYHV SGEYAMLHAA 310 320 330 340 AEKGIVDLKG IAFESHQGFL RAGARLIISY FTPEFLEWLD

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed: 17334359] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000496 Genomic DNA. Translation: ABN64293.2.
RefSeq	XP_001382322.2. XM_001382285.1.
3D structure databases
ProteinModelPortal	A3LN97.
SMR	A3LN97. Positions 2-340.
ModBase	Search...
Protein-protein interaction databases
STRING	A3LN97.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4837367.
KEGG	pic:PICST_54024.
Phylogenomic databases
eggNOG	fuNOG07497.
HOGENOM	HBG285270.
OMA	GAHCVAP.
OrthoDB	EOG454D75.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR001731. Porphobilinogen_synth. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01698.
PANTHER	PTHR11458. AlaD_dehydratase. 1 hit.
Pfam	PF00490. ALAD. 1 hit. [Graphical view]
PIRSF	PIRSF001415. Porphbilin_synth. 1 hit.
PRINTS	PR00144. DALDHYDRTASE.
SMART	SM01004. ALAD. 1 hit. [Graphical view]
PROSITE	PS00169. D_ALA_DEHYDRATASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3LN97_PICST

Accession

Primary (citable) accession number: A3LN97

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	July 24, 2007
Last modified:	January 25, 2012
This is version 37 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)