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A3KPC9 (A3KPC9_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Cacna1s EMBL AAI34370.1 MGI 88294
OrganismMus musculus (Mouse) EMBL AAI34370.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length291 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processcalcium ion import

Inferred from Biological aspect of Ancestor. Source: RefGenome

calcium ion transport

Inferred from direct assay PubMed 12954602. Source: MGI

endoplasmic reticulum organization

Inferred from mutant phenotype PubMed 5041196. Source: MGI

extraocular skeletal muscle development

Inferred from mutant phenotype PubMed 14618389. Source: MGI

membrane depolarization during action potential

Inferred from Biological aspect of Ancestor. Source: RefGenome

muscle cell development

Inferred from mutant phenotype PubMed 5041196. Source: MGI

muscle contraction

Inferred from direct assay PubMed 8143864. Source: MGI

myoblast fusion

Inferred from mutant phenotype PubMed 10949052. Source: MGI

neuromuscular junction development

Inferred from mutant phenotype PubMed 6692971PubMed 6692972PubMed 7286424. Source: MGI

skeletal muscle adaptation

Inferred from mutant phenotype PubMed 2419767. Source: MGI

skeletal muscle fiber development

Inferred from direct assay PubMed 8143864. Source: MGI

skeletal muscle tissue development

Inferred from mutant phenotype PubMed 14300095PubMed 14300096PubMed 6500174PubMed 7635187. Source: MGI

skeletal system development

Inferred from mutant phenotype PubMed 6501560. Source: MGI

striated muscle contraction

Inferred from mutant phenotype PubMed 1281468. Source: MGI

   Cellular_componentT-tubule

Inferred from direct assay PubMed 10444070PubMed 15536090PubMed 8943043. Source: MGI

sarcoplasmic reticulum

Inferred from direct assay PubMed 12954602PubMed 15536090PubMed 8943043. Source: MGI

   Molecular_functionhigh voltage-gated calcium channel activity

Inferred from Biological aspect of Ancestor. Source: RefGenome

voltage-gated calcium channel activity

Inferred from direct assay PubMed 12954602. Source: MGI

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3KPC9 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: 681D7DAE084BBA27

FASTA29133,119
        10         20         30         40         50         60 
MEPPSPQDEF KAIWAEYDPE AKGRIKHLDV VTLLRRIQPP LGFGKFCPHR VACKRLVGMN 

        70         80         90        100        110        120 
MPLNSDGTVT FNATLFALVR TALKIKTEGN FEQANEELRA IIKKIWKRTS MKLLDQVIPP 

       130        140        150        160        170        180 
IGDDEVTVGK FYATFLIQEH FRKFMKRQEE YYGYRPKKDT VQIQAGLRTI EEEAAPEIHR 

       190        200        210        220        230        240 
AISGDLTAEE ELERAMVEAA MEEGIFRRTG GLFGQVDNFL ERTNSLPPVM ANQRPLQFAE 

       250        260        270        280        290 
IEMEELESPV FLEDFPQNPG THPLARANTN NANANVAYGN SSHRNNPVFS R 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: PCR rescued clones EMBL AAI34370.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC134369 mRNA. Translation: AAI34370.1.
UniGeneMm.4418.

3D structure databases

ProteinModelPortalA3KPC9.
SMRA3KPC9. Positions 3-150.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:88294. Cacna1s.

Phylogenomic databases

HOGENOMHOG000231529.
InParanoidA3KPC9.

Gene expression databases

GenevestigatorA3KPC9.

Family and domain databases

InterProIPR014873. VDCC_a1su_IQ.
[Graphical view]
PfamPF08763. Ca_chan_IQ. 1 hit.
[Graphical view]
SMARTSM01062. Ca_chan_IQ. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35544715.
SOURCESearch...

Entry information

Entry nameA3KPC9_MOUSE
AccessionPrimary (citable) accession number: A3KPC9
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)