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A3KPC9

- A3KPC9_MOUSE

UniProt

A3KPC9 - A3KPC9_MOUSE

Protein
Submitted name:

Cacna1s protein

Gene

Cacna1s

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (03 Apr 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. high voltage-gated calcium channel activity Source: RefGenome
    2. voltage-gated calcium channel activity Source: MGI

    GO - Biological processi

    1. calcium ion import Source: RefGenome
    2. calcium ion transmembrane transport Source: GOC
    3. calcium ion transport Source: MGI
    4. endoplasmic reticulum organization Source: MGI
    5. extraocular skeletal muscle development Source: MGI
    6. membrane depolarization during action potential Source: RefGenome
    7. muscle cell development Source: MGI
    8. muscle contraction Source: MGI
    9. myoblast fusion Source: MGI
    10. neuromuscular junction development Source: MGI
    11. skeletal muscle adaptation Source: MGI
    12. skeletal muscle fiber development Source: MGI
    13. skeletal muscle tissue development Source: MGI
    14. skeletal system development Source: MGI
    15. striated muscle contraction Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Cacna1s proteinImported
    Gene namesi
    Name:Cacna1sImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:88294. Cacna1s.

    Subcellular locationi

    GO - Cellular componenti

    1. sarcoplasmic reticulum Source: MGI
    2. T-tubule Source: MGI

    Expressioni

    Gene expression databases

    GenevestigatoriA3KPC9.

    Structurei

    3D structure databases

    ProteinModelPortaliA3KPC9.
    SMRiA3KPC9. Positions 3-150.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000231529.
    InParanoidiA3KPC9.

    Family and domain databases

    InterProiIPR014873. VDCC_a1su_IQ.
    [Graphical view]
    PfamiPF08763. Ca_chan_IQ. 1 hit.
    [Graphical view]
    SMARTiSM01062. Ca_chan_IQ. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A3KPC9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEPPSPQDEF KAIWAEYDPE AKGRIKHLDV VTLLRRIQPP LGFGKFCPHR    50
    VACKRLVGMN MPLNSDGTVT FNATLFALVR TALKIKTEGN FEQANEELRA 100
    IIKKIWKRTS MKLLDQVIPP IGDDEVTVGK FYATFLIQEH FRKFMKRQEE 150
    YYGYRPKKDT VQIQAGLRTI EEEAAPEIHR AISGDLTAEE ELERAMVEAA 200
    MEEGIFRRTG GLFGQVDNFL ERTNSLPPVM ANQRPLQFAE IEMEELESPV 250
    FLEDFPQNPG THPLARANTN NANANVAYGN SSHRNNPVFS R 291
    Length:291
    Mass (Da):33,119
    Last modified:April 3, 2007 - v1
    Checksum:i681D7DAE084BBA27
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC134369 mRNA. Translation: AAI34370.1.
    UniGeneiMm.4418.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC134369 mRNA. Translation: AAI34370.1 .
    UniGenei Mm.4418.

    3D structure databases

    ProteinModelPortali A3KPC9.
    SMRi A3KPC9. Positions 3-150.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:88294. Cacna1s.

    Phylogenomic databases

    HOGENOMi HOG000231529.
    InParanoidi A3KPC9.

    Miscellaneous databases

    NextBioi 35544715.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori A3KPC9.

    Family and domain databases

    InterProi IPR014873. VDCC_a1su_IQ.
    [Graphical view ]
    Pfami PF08763. Ca_chan_IQ. 1 hit.
    [Graphical view ]
    SMARTi SM01062. Ca_chan_IQ. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: PCR rescued clonesImported.

    Entry informationi

    Entry nameiA3KPC9_MOUSE
    AccessioniPrimary (citable) accession number: A3KPC9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 3, 2007
    Last sequence update: April 3, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)