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A3KP47 (A3KP47_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Zgc:162941 protein EMBL AAI34160.1
Gene names
Name:zgc:162941 Ensembl ENSDARP00000096987
ORF Names:zgc:162941 ZFIN ZDB-GENE-030131-8517
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI34160.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length185 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
A3KP47 [UniParc].

Last modified April 3, 2007. Version 1.
Checksum: 61B9149C5285B100

FASTA18520,466
        10         20         30         40         50         60 
MACIYGDIMK VGTTGASKKT AEQDKLSVTG VEASKKLAEH DLARMEKYKT KIINVGRAKQ 

        70         80         90        100        110        120 
MDPAVIAAII SRESRAGAIL KDGWGDHGNG FGLMQVDKRY HTPVGAWDSE QHLTQATEIL 

       130        140        150        160        170        180 
IGFIKEIKEK FAKWSQEQCF KGGISAYNAG VKNVQTYEHV DDHTTGHDYG NDVVARAQWF 


KSKGY 

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References

« Hide 'large scale' references
[1]"The genomic sequence of Danio rerio."
The Danio rerio Sequencing Project at the Sanger Institute
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen.
[2]Ensembl
Submitted (JUN-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000096987.
[3]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Gill EMBL AAI34160.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR774199 Genomic DNA. No translation available.
BC134159 mRNA. Translation: AAI34160.1.
IPIIPI00844885.
RefSeqNP_001076289.1. NM_001082820.1.
UniGeneDr.132255.

3D structure databases

ProteinModelPortalA3KP47.
SMRA3KP47. Positions 5-185.
ModBaseSearch...

Protein family/group databases

CAZyGH23. Glycoside Hydrolase Family 23.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000106209; ENSDARP00000096987; ENSDARG00000071701.
GeneID559821.
KEGGdre:559821.
NMPDRfig|7955.3.peg.24493.

Organism-specific databases

ZFINZDB-GENE-030131-8517. zgc:162941.

Phylogenomic databases

eggNOGfiNOG16201.
GeneTreeENSGT00390000017614.
HOGENOMHBG444152.
HOVERGENHBG006299.
InParanoidA3KP47.
OMANGEAHIR.
OrthoDBEOG4ZS941.

Gene expression databases

BgeeA3KP47.

Family and domain databases

InterProIPR002152. Glyco_hydro_23.
IPR023346. Lysozyme-like_dom.
IPR008258. Lytic_TGlycosylase-like_cat.
[Graphical view]
PfamPF01464. SLT. 1 hit.
[Graphical view]
PIRSFPIRSF001065. Lysozyme_g. 1 hit.
PRINTSPR00749. LYSOZYMEG.
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3KP47_DANRE
AccessionPrimary (citable) accession number: A3KP47
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 16, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)