A3KNA2 (A3KNA2_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nrp1b protein EMBL AAI33731.1

Gene names

Name:

nrp1b EMBL AAI33731.1 ZFIN ZDB-GENE-040611-1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI33731.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	959 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 2 F5/8 type C domains. RuleBase RU003308

Ontologies

Gene Ontology (GO)
Biological process	angiogenesis Inferred from mutant phenotype. Source: ZFIN cell adhesion Inferred from electronic annotation. Source: InterPro regulation of vascular endothelial growth factor receptor signaling pathway Inferred from mutant phenotype. Source: ZFIN vasculogenesis Inferred from mutant phenotype. Source: ZFIN
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: ZFIN
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3KNA2 [UniParc]. Last modified April 3, 2007. Version 1. Checksum: EBB2424CD0FE3913	FASTA	959	107,436
	10 20 30 40 50 60 MYWCLLCVTL TGLSVARALT DRPCGGKITI TSAGYVTSPD YPTGYPVNKQ CTWLIQAPDP 70 80 90 100 110 120 QQKILINFNP HFDLESRECK YDFVQVFDGA DENALSLGRF CGKIAPSPII SSGNSLLIKF 130 140 150 160 170 180 TSDYESAGAG FSIRYEIHRT GTECSRNFTE PHGLIETPGF PDKYPNNLEC TFIIFAPKMA 190 200 210 220 230 240 EIILDFQSFD MEPDTTAPAG AVCRFDYLEI WDGYPTVGPH IGRYCGSSHP GRVISYTGIL 250 260 270 280 290 300 SLSIHTDNAI TKEGFSANYS IRGSSDQLQP HQDECMYPLG MESGEITEDR IAASSQYNPS 310 320 330 340 350 360 WSRLRSRLNY LENGWTPSED SSREWIQVDL GFLRYVTAIG TQGAISKETK KAYFVRTYRI 370 380 390 400 410 420 SVSSNGEDWI TLKDKTKQMV FQGNDNPTDE VRALLPKPTL TRYIRIRPLL WEQGICMRFE 430 440 450 460 470 480 VYGCKIPDAP CSNMLGMVSG QISDSQISVW PSAERGWLPE QARLLTGRTG WVVAHPQGLV 490 500 510 520 530 540 KNQSLELDLG AQRMVTGLVL QGGKYRDLNI FIKRFRVTYS VNGTDWSHIL EENSNKVKVF 550 560 570 580 590 600 IGNQNHDTPE VRTFDPVLMR FLRIYPERGS PDGMGLRLEV LGCDLQEPTT PLPLATTMET 610 620 630 640 650 660 TAATVTSASM LLGNIPTTTT FPTTAENCDD DDGNCHSDAL TDYDTTETAV AELFLEMEEA 670 680 690 700 710 720 PAYLWFACDF GWIDHPSYCW WSQDGGEGAE WHINNNSKHA DHKLPSLDHT GMPNNFIYAA 730 740 750 760 770 780 ANTNTQTEME RMDEMETDEE LERKGGRVAR LASSQVTAPD SDLCMSFWYH FTEKHAGTLN 790 800 810 820 830 840 IKQKVEHEQV DEEREILIRL LNGQTKSRWR EGRVLLPSAD TPYQVIIEAQ VDPTHSGYIS 850 860 870 880 890 900 LDDIKIVEVD PEDCKDPENT EDDEDEVEEI VNCEGTDNTM WSFGRGSMLK SLDPILITII 910 920 930 940 950 VMSAVGVLLG AVCGVLFYCA CAHTTNRNLS ALENYNFELV DGVKLKKEKL SAQKSYTEA

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Embryo EMBL AAI33731.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC133730 mRNA. Translation: AAI33731.1.
IPI	IPI00482482.
UniGene	Dr.132331.
3D structure databases
ProteinModelPortal	A3KNA2.
SMR	A3KNA2. Positions 143-586.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-040611-1. nrp1b.
Phylogenomic databases
HOGENOM	HBG714573.
HOVERGEN	HBG000502.
Gene expression databases
Bgee	A3KNA2.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008985. ConA-like_lec_gl. IPR000859. CUB. IPR008979. Galactose-bd-like. IPR000998. MAM_dom. IPR014648. Neuropilin. IPR022579. Neuropilin1_C. [Graphical view]
Gene3D	G3DSA:2.60.120.290. CUB. 2 hits.
Pfam	PF00431. CUB. 2 hits. PF11980. DUF3481. 1 hit. PF00754. F5_F8_type_C. 2 hits. PF00629. MAM. 1 hit. [Graphical view]
PIRSF	PIRSF036960. Neuropilin. 1 hit.
SMART	SM00042. CUB. 2 hits. SM00231. FA58C. 2 hits. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF49854. CUB. 2 hits. SSF49785. Gal_bind_like. 2 hits.
PROSITE	PS01180. CUB. 2 hits. PS01285. FA58C_1. 1 hit. PS01286. FA58C_2. 2 hits. PS50022. FA58C_3. 2 hits. PS50060. MAM_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3KNA2_DANRE

Accession

Primary (citable) accession number: A3KNA2

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	April 3, 2007
Last modified:	October 19, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)