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Protein

Outer dense fiber protein 2

Gene

Odf2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Seems to be a major component of sperm tail outer dense fibers (ODF). ODFs are filamentous structures located on the outside of the axoneme in the midpiece and principal piece of the mammalian sperm tail and may help to maintain the passive elastic structures and elastic recoil of the sperm tail. May have a modulating influence on sperm motility. Functions as a general scaffold protein that is specifically localized at the distal/subdistal appendages of mother centrioles. Component of the centrosome matrix required for the localization of PLK1 and NIN to the centrosomes. Required for the formation and/or maintenance of normal CETN1 assembly (By similarity).By similarity1 Publication

GO - Molecular functioni

  • Rab GTPase binding Source: MGI
  • structural constituent of cytoskeleton Source: MGI

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Developmental protein

Keywords - Biological processi

Differentiation, Spermatogenesis

Enzyme and pathway databases

ReactomeiR-MMU-2565942. Regulation of PLK1 Activity at G2/M Transition.
R-MMU-380259. Loss of Nlp from mitotic centrosomes.
R-MMU-380270. Recruitment of mitotic centrosome proteins and complexes.
R-MMU-5620912. Anchoring of the basal body to the plasma membrane.
R-MMU-8854518. AURKA Activation by TPX2.

Names & Taxonomyi

Protein namesi
Recommended name:
Outer dense fiber protein 2
Alternative name(s):
84 kDa outer dense fiber protein
Cenexin
Outer dense fiber of sperm tails protein 2
Gene namesi
Name:Odf2
Synonyms:Odf84
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1098824. Odf2.

Subcellular locationi

GO - Cellular componenti

  • centriole Source: MGI
  • centrosome Source: MGI
  • ciliary basal body Source: MGI
  • ciliary transition fiber Source: MGI
  • cilium Source: MGI
  • microtubule Source: UniProtKB-KW
  • nucleus Source: MGI
  • outer dense fiber Source: Ensembl
  • primary cilium Source: Ensembl
  • spindle pole Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell projection, Cilium, Cytoplasm, Cytoskeleton, Microtubule

Pathology & Biotechi

Disruption phenotypei

Null mutations in F9 embryonic carcinoma cells eliminated distal/subdistal appendages and prevented primary cilium formation. Loss of ODF2 also disrupted two mother centriole-specific NIN dots, while leaving one dot on the proximal end of mother and daughter centrioles.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 830830Outer dense fiber protein 2PRO_0000299458Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei73 – 731PhosphoserineBy similarity
Modified residuei74 – 741PhosphoserineBy similarity
Modified residuei92 – 921PhosphothreonineBy similarity
Modified residuei106 – 1061PhosphoserineBy similarity
Modified residuei109 – 1091PhosphoserineBy similarity
Modified residuei110 – 1101PhosphothreonineBy similarity
Modified residuei115 – 1151PhosphoserineBy similarity
Modified residuei129 – 1291PhosphoserineBy similarity
Modified residuei139 – 1391PhosphoserineBy similarity
Modified residuei231 – 2311PhosphothreonineBy similarity
Modified residuei261 – 2611PhosphoserineBy similarity
Modified residuei632 – 6321PhosphoserineBy similarity

Post-translational modificationi

Tyrosine phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiA3KGV1.
MaxQBiA3KGV1.
PaxDbiA3KGV1.
PeptideAtlasiA3KGV1.
PRIDEiA3KGV1.

2D gel databases

REPRODUCTION-2DPAGEA3KGV1.
IPI00130958.

PTM databases

iPTMnetiA3KGV1.
PhosphoSiteiA3KGV1.

Expressioni

Tissue specificityi

Testis-specific (at protein level) (PubMed:9045620). Expressed in spermatids at tubular stage V of the spermatogenic cycle (PubMed:9740324). Highly expressed in the cytoplasm of elongating spermatids (tubular stages X/XI) (PubMed:9740324). In step 14/15 spermatids of tubular stage III/IV low expression detected (PubMed:9740324). No expression detected in other testicular cells as well as the early round of spermatids (PubMed:9740324).2 Publications

Gene expression databases

BgeeiA3KGV1.
CleanExiMM_ODF2.
ExpressionAtlasiA3KGV1. baseline and differential.
GenevisibleiA3KGV1. MM.

Interactioni

Subunit structurei

Self-associates. Associates with microtubules and forms a fibrillar structure partially linked to the microtubule network. Interacts via its C-terminus with PLK1 (By similarity). Interacts with ODF1 (PubMed:9045620). Interacts with MARK4; the interaction is required for localization of ODF2 to centrioles (By similarity).By similarity1 Publication

GO - Molecular functioni

Protein-protein interaction databases

BioGridi201898. 3 interactions.
IntActiA3KGV1. 3 interactions.
STRINGi10090.ENSMUSP00000109388.

Structurei

3D structure databases

ProteinModelPortaliA3KGV1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili144 – 21774Sequence analysisAdd
BLAST
Coiled coili245 – 423179Sequence analysisAdd
BLAST
Coiled coili461 – 798338Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the ODF2 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IE8V. Eukaryota.
ENOG4111XWH. LUCA.
GeneTreeiENSGT00530000063497.
HOVERGENiHBG052808.
InParanoidiA3KGV1.
KOiK16479.
OMAiHAISKER.
PhylomeDBiA3KGV1.
TreeFamiTF328605.

Family and domain databases

InterProiIPR026099. Odf2-rel.
[Graphical view]
PANTHERiPTHR23162. PTHR23162. 1 hit.

Sequences (7)i

Sequence statusi: Complete.

This entry describes 7 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: A3KGV1-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MSASSSGGSP RFPSCGKNGV TSLTQKKVLR TPCGAPSVTV TKSHKRGMKG
60 70 80 90 100
DTVNVRRSVR VKTKVPWMPP GKSSARHVGC KWENPPHCLE ITPPSSEKLV
110 120 130 140 150
SVMRLSDLST EDDDSGHCKM NRYDKKIDSL MNAVGCLKSE VKMQKGERQM
160 170 180 190 200
AKRFLEERKE ELEEVAHELA ETEHENTVLR HNIERIKEEK DFTMLQKKHL
210 220 230 240 250
QQEKECLMSK LVEAEMDGAA AAKQVMALKD TIGKLKTEKQ MTCTDINTLT
260 270 280 290 300
RQKELLLQKL STFEETNRTL RDLLREQHCK EDSERLMEQQ GTLLKRLAEA
310 320 330 340 350
DSEKARLLLL LQDKDKEVEE LLQEIQCEKA QAKTASELSK SMESMRGHLQ
360 370 380 390 400
AQLRCKEAEN SRLCMQIKNL ERSGNQHKAE VEAIMEQLKE LKQKGDRDKE
410 420 430 440 450
TLKKAIRAQK ERAEKSEEYA EQLHVQLADK DLYVAEALST LESWRSRYNQ
460 470 480 490 500
VVKDKGDLEL EIIVLNDRVT DLVNQQQSLE EKMREDRDSL VERLHRQTAE
510 520 530 540 550
YSAFKLENER LKASFAPMED KLNQAHLEVQ QLKASVKNYE GMIDNYKSQV
560 570 580 590 600
MKTRLEADEV AAQLERCDKE NKMLKDEMNK EIEAARRQFQ SQLADLQQLP
610 620 630 640 650
DILKITEAKL AECQDQLQGY ERKNIDLTAI ISDLRSRIEH QGDKLEMARE
660 670 680 690 700
KHQASQKENK QLSQKVDELE RKLEATSAQN VEFLQVIAKR EEAIHQAQLR
710 720 730 740 750
LEEKTRECGS LARQLESAIE DARRQVEQTK EQALSKERAA QSKILDLETQ
760 770 780 790 800
LSRTKTELGQ LRRTRDDADR RYQSRLQDLK DRLEQSESTN RSMQNYVQFL
810 820 830
KASYANVFGD APYTSSYLTS SPIRSRSPPA
Note: Gene prediction based on EST data.
Length:830
Mass (Da):95,541
Last modified:April 3, 2007 - v1
Checksum:iC840B47EC10EF82A
GO
Isoform 2 (identifier: A3KGV1-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-41: MSASSSGGSP...PCGAPSVTVT → MKDRSSTPPL...LPKPSAASSQ
     65-83: Missing.

Note: Gene prediction based on EST data.
Show »
Length:806
Mass (Da):93,294
Checksum:i4EA09B8F2B830917
GO
Isoform 3 (identifier: A3KGV1-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-41: MSASSSGGSP...PCGAPSVTVT → MKDRSSTPPL...LPKPSAASSQ

Note: No experimental confirmation available.
Show »
Length:825
Mass (Da):95,428
Checksum:i2C9CA2383DE85B81
GO
Isoform 4 (identifier: A3KGV1-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-41: MSASSSGGSP...PCGAPSVTVT → MKDRSSTPPL...LPKPSAASSQ
     281-281: E → EK

Note: No experimental confirmation available.
Show »
Length:826
Mass (Da):95,556
Checksum:i9C8D6973FDB5E2C9
GO
Isoform 5 (identifier: A3KGV1-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-41: MSASSSGGSP...PCGAPSVTVT → MKDRSSTPPL...LPKPSAASSQ
     638-657: IEHQGDKLEMAREKHQASQK → VRDWQKGSHELARAGARLPR
     658-830: Missing.

Note: No experimental confirmation available.
Show »
Length:652
Mass (Da):75,410
Checksum:i9545123A1A29B617
GO
Isoform 6 (identifier: A3KGV1-6) [UniParc]FASTAAdd to basket

Also known as: ODF2/2

The sequence of this isoform differs from the canonical sequence as follows:
     65-83: Missing.
     638-657: IEHQGDKLEMAREKHQASQK → VRDWQKGSHELARAGARLPR
     658-830: Missing.

Show »
Length:638
Mass (Da):73,389
Checksum:i23DC7851F0626B2E
GO
Isoform 7 (identifier: A3KGV1-7) [UniParc]FASTAAdd to basket

Also known as: ODF2/1

The sequence of this isoform differs from the canonical sequence as follows:
     1-47: Missing.
     638-657: IEHQGDKLEMAREKHQASQK → VRDWQKGSHELARAGARLPR
     658-830: Missing.

Show »
Length:610
Mass (Da):70,765
Checksum:i6ED88AB7A191A70B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti349 – 3491L → W in AAH57001 (PubMed:16141072).Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 4747Missing in isoform 7. 1 PublicationVSP_027671Add
BLAST
Alternative sequencei1 – 4141MSASS…SVTVT → MKDRSSTPPLHVHVDENTPV HVHIKKLPKPSAASSQ in isoform 2, isoform 3, isoform 4 and isoform 5. 2 PublicationsVSP_027672Add
BLAST
Alternative sequencei65 – 8319Missing in isoform 2 and isoform 6. 1 PublicationVSP_027673Add
BLAST
Alternative sequencei281 – 2811E → EK in isoform 4. 1 PublicationVSP_027674
Alternative sequencei638 – 65720IEHQG…QASQK → VRDWQKGSHELARAGARLPR in isoform 5, isoform 6 and isoform 7. 2 PublicationsVSP_027675Add
BLAST
Alternative sequencei658 – 830173Missing in isoform 5, isoform 6 and isoform 7. 2 PublicationsVSP_027676Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF000968 mRNA. Translation: AAB65157.1.
AF034105 mRNA. Translation: AAB87525.1.
AK143726 mRNA. Translation: BAE25517.1.
AK168415 mRNA. Translation: BAE40330.1.
AL928926 Genomic DNA. Translation: CAM46225.1.
AL928926 Genomic DNA. Translation: CAM46226.1.
AL928926 Genomic DNA. Translation: CAM46229.1.
AL928926 Genomic DNA. Translation: CAM46230.1.
AL928926 Genomic DNA. Translation: CAM46231.1.
AL928926 Genomic DNA. Translation: CAM46232.1.
BC057001 mRNA. Translation: AAH57001.1.
CCDSiCCDS15861.1. [A3KGV1-6]
CCDS50555.1. [A3KGV1-4]
CCDS50556.1. [A3KGV1-3]
CCDS50557.1. [A3KGV1-5]
PIRiT02298.
T09400.
RefSeqiNP_001106684.1. NM_001113213.1. [A3KGV1-3]
NP_001106685.1. NM_001113214.1. [A3KGV1-5]
NP_001171130.1. NM_001177659.1. [A3KGV1-4]
NP_001171132.1. NM_001177661.1.
NP_038643.1. NM_013615.3. [A3KGV1-6]
UniGeneiMm.330116.

Genome annotation databases

EnsembliENSMUST00000028128; ENSMUSP00000028128; ENSMUSG00000026790. [A3KGV1-6]
ENSMUST00000046571; ENSMUSP00000049272; ENSMUSG00000026790. [A3KGV1-3]
ENSMUST00000113755; ENSMUSP00000109384; ENSMUSG00000026790. [A3KGV1-5]
ENSMUST00000113756; ENSMUSP00000109385; ENSMUSG00000026790. [A3KGV1-3]
ENSMUST00000113757; ENSMUSP00000109386; ENSMUSG00000026790. [A3KGV1-2]
ENSMUST00000113759; ENSMUSP00000109388; ENSMUSG00000026790. [A3KGV1-4]
ENSMUST00000113763; ENSMUSP00000109392; ENSMUSG00000026790. [A3KGV1-6]
ENSMUST00000113764; ENSMUSP00000109393; ENSMUSG00000026790. [A3KGV1-6]
ENSMUST00000113765; ENSMUSP00000109394; ENSMUSG00000026790. [A3KGV1-1]
GeneIDi18286.
KEGGimmu:18286.
UCSCiuc008jaj.2. mouse. [A3KGV1-5]
uc008jak.2. mouse. [A3KGV1-3]
uc008jam.2. mouse. [A3KGV1-6]
uc033hmh.1. mouse. [A3KGV1-4]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF000968 mRNA. Translation: AAB65157.1.
AF034105 mRNA. Translation: AAB87525.1.
AK143726 mRNA. Translation: BAE25517.1.
AK168415 mRNA. Translation: BAE40330.1.
AL928926 Genomic DNA. Translation: CAM46225.1.
AL928926 Genomic DNA. Translation: CAM46226.1.
AL928926 Genomic DNA. Translation: CAM46229.1.
AL928926 Genomic DNA. Translation: CAM46230.1.
AL928926 Genomic DNA. Translation: CAM46231.1.
AL928926 Genomic DNA. Translation: CAM46232.1.
BC057001 mRNA. Translation: AAH57001.1.
CCDSiCCDS15861.1. [A3KGV1-6]
CCDS50555.1. [A3KGV1-4]
CCDS50556.1. [A3KGV1-3]
CCDS50557.1. [A3KGV1-5]
PIRiT02298.
T09400.
RefSeqiNP_001106684.1. NM_001113213.1. [A3KGV1-3]
NP_001106685.1. NM_001113214.1. [A3KGV1-5]
NP_001171130.1. NM_001177659.1. [A3KGV1-4]
NP_001171132.1. NM_001177661.1.
NP_038643.1. NM_013615.3. [A3KGV1-6]
UniGeneiMm.330116.

3D structure databases

ProteinModelPortaliA3KGV1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi201898. 3 interactions.
IntActiA3KGV1. 3 interactions.
STRINGi10090.ENSMUSP00000109388.

PTM databases

iPTMnetiA3KGV1.
PhosphoSiteiA3KGV1.

2D gel databases

REPRODUCTION-2DPAGEA3KGV1.
IPI00130958.

Proteomic databases

EPDiA3KGV1.
MaxQBiA3KGV1.
PaxDbiA3KGV1.
PeptideAtlasiA3KGV1.
PRIDEiA3KGV1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000028128; ENSMUSP00000028128; ENSMUSG00000026790. [A3KGV1-6]
ENSMUST00000046571; ENSMUSP00000049272; ENSMUSG00000026790. [A3KGV1-3]
ENSMUST00000113755; ENSMUSP00000109384; ENSMUSG00000026790. [A3KGV1-5]
ENSMUST00000113756; ENSMUSP00000109385; ENSMUSG00000026790. [A3KGV1-3]
ENSMUST00000113757; ENSMUSP00000109386; ENSMUSG00000026790. [A3KGV1-2]
ENSMUST00000113759; ENSMUSP00000109388; ENSMUSG00000026790. [A3KGV1-4]
ENSMUST00000113763; ENSMUSP00000109392; ENSMUSG00000026790. [A3KGV1-6]
ENSMUST00000113764; ENSMUSP00000109393; ENSMUSG00000026790. [A3KGV1-6]
ENSMUST00000113765; ENSMUSP00000109394; ENSMUSG00000026790. [A3KGV1-1]
GeneIDi18286.
KEGGimmu:18286.
UCSCiuc008jaj.2. mouse. [A3KGV1-5]
uc008jak.2. mouse. [A3KGV1-3]
uc008jam.2. mouse. [A3KGV1-6]
uc033hmh.1. mouse. [A3KGV1-4]

Organism-specific databases

CTDi4957.
MGIiMGI:1098824. Odf2.

Phylogenomic databases

eggNOGiENOG410IE8V. Eukaryota.
ENOG4111XWH. LUCA.
GeneTreeiENSGT00530000063497.
HOVERGENiHBG052808.
InParanoidiA3KGV1.
KOiK16479.
OMAiHAISKER.
PhylomeDBiA3KGV1.
TreeFamiTF328605.

Enzyme and pathway databases

ReactomeiR-MMU-2565942. Regulation of PLK1 Activity at G2/M Transition.
R-MMU-380259. Loss of Nlp from mitotic centrosomes.
R-MMU-380270. Recruitment of mitotic centrosome proteins and complexes.
R-MMU-5620912. Anchoring of the basal body to the plasma membrane.
R-MMU-8854518. AURKA Activation by TPX2.

Miscellaneous databases

PROiA3KGV1.
SOURCEiSearch...

Gene expression databases

BgeeiA3KGV1.
CleanExiMM_ODF2.
ExpressionAtlasiA3KGV1. baseline and differential.
GenevisibleiA3KGV1. MM.

Family and domain databases

InterProiIPR026099. Odf2-rel.
[Graphical view]
PANTHERiPTHR23162. PTHR23162. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Mouse Odf2 cDNAs consist of evolutionary conserved as well as highly variable sequences and encode outer dense fiber proteins of the sperm tail."
    Hoyer-Fender S., Petersen C., Brohmann H., Rhee K., Wolgemuth D.J.
    Mol. Reprod. Dev. 51:167-175(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 6 AND 7), TISSUE SPECIFICITY, ALTERNATIVE SPLICING.
    Tissue: Sperm.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 4 AND 5).
    Strain: C57BL/6J.
    Tissue: Spleen.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
    Strain: C57BL/6J.
    Tissue: Brain.
  5. "Interactional cloning of the 84-kDa major outer dense fiber protein Odf84. Leucine zippers mediate associations of Odf84 and Odf27."
    Shao X., Tarnasky H.A., Schalles U., Oko R., van der Hoorn F.A.
    J. Biol. Chem. 272:6105-6113(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, INTERACTION WITH ODF1.
  6. "Odf2-deficient mother centrioles lack distal/subdistal appendages and the ability to generate primary cilia."
    Ishikawa H., Kubo A., Tsukita S., Tsukita S.
    Nat. Cell Biol. 7:517-524(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, SUBCELLULAR LOCATION, DISRUPTION PHENOTYPE.
  7. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Kidney, Lung, Spleen and Testis.

Entry informationi

Entry nameiODFP2_MOUSE
AccessioniPrimary (citable) accession number: A3KGV1
Secondary accession number(s): A3KGV5
, A3KGV6, O35135, O35496, Q3TH68, Q3UP80, Q6PGI6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: April 3, 2007
Last modified: July 6, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.