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A3GHR1 (A3GHR1_PICST) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length569 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAZ63096.2

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3GHR1 [UniParc].

Last modified June 16, 2009. Version 2.
Checksum: 866EBC8F0D1A0A32

FASTA56963,950
        10         20         30         40         50         60 
MTLSKHIDAE VLETALLKNA VKSKLTKREE YISQYDSEKL VPKYEIPSHS SSGELVYKYL 

        70         80         90        100        110        120 
SEELTLDGNP TLNLASFVNT SCDDTQLKLI TDNIVKNLAD NDEYPSLIDF QQRCISILSN 

       130        140        150        160        170        180 
LWHAPTKVDS TGKKVINSIG TATTGSSEAI MLAGLALKKR WQEKRKAAGK STENPNIIMA 

       190        200        210        220        230        240 
SVAQVALEKF ARYFDVEDRL IHVNEESGHL IDISKIKEAV DENTIGIFVI LGSTFTGAFE 

       250        260        270        280        290        300 
PVEQISHLLD EIEKEKGLDV RIHVDGASGG FVAPFVYPHL KWDFQIPRVD SINTSGHKFG 

       310        320        330        340        350        360 
LTTAGLGWVI WKDSELLPKS LKFSLDYLGG VEETFGLNFS RAGFPVVLQY YNFLTLGKEG 

       370        380        390        400        410        420 
YSKIFNSCIS NARLLSNILE KSEYFEVLSV IHKEVSDERA AQVYTKVHHV DSKHTKEAIH 

       430        440        450        460        470        480 
NEKFEPGLPV VAFRFSKELR ETYPEIPQGI FSTLLRNKGY IVPNYHLPPD EGEKEILRVV 

       490        500        510        520        530        540 
VRQSLSLNLL EKLVKDSIEA VELLIKSCKD VRDVIHAKHT TEEVDKGLVY SLLLSISSGG 

       550        560 
VEDKKEIQHE QLKQASVNPK HKRRYRATC

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References

[1]"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis."
Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M.
Nat. Biotechnol. 25:319-326(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AAVQ01000002 Genomic DNA. Translation: EAZ63096.2.
RefSeqXP_001387119.2. XM_001387082.1.

3D structure databases

ProteinModelPortalA3GHR1.
ModBaseSearch...

Protein-protein interaction databases

STRING4924.PICST_40180.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4851810.
KEGGpic:PICST_40180.

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMARHINAEE.
OrthoDBEOG43R6W5.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3GHR1_PICST
AccessionPrimary (citable) accession number: A3GHR1
Entry history
Integrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: June 16, 2009
Last modified: May 1, 2013
This is version 41 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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