A3GHK0 (A3GHK0_PICST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL EAZ63068.2

Gene names

ORF Names:

PICST_66630 EMBL EAZ63068.2

Organism

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) [Complete proteome] EMBL EAZ63068.2

Taxonomic identifier

322104 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Scheffersomyces › Scheffersomyces stipitis

Protein attributes

Sequence length	950 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities	Contains 1 HECT (E6AP-type E3 ubiquitin-protein ligase) domain. SAAS SAAS000569
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAZ63068.2

Ontologies

Keywords
Biological process	Ubl conjugation pathway SAAS SAAS000569
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protein ubiquitination Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	ubiquitin-protein ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3GHK0 [UniParc]. Last modified June 16, 2009. Version 2. Checksum: 246A381EA5945C40	FASTA	950	107,316
	10 20 30 40 50 60 MLRRKSSVVA QNQNSPRNQN HNQSHNQINN AEQNTNSSNS SQISSTIASE PRSTPWRIKD 70 80 90 100 110 120 FLKLPSAPKG SNSNTVSTSP TKSNVEQLVA PTTSTSISNT SANSNSAATS DSIPTSVSGC 130 140 150 160 170 180 YCCGTLLTYP TKASKFRCSV CNTTNILAVA PENSAEGSNE AVHIISYDYV KKQVEKCLKY 190 200 210 220 230 240 LNQSSDKSIH EVFEPLSDYL YDAFKNYHIL SKSFKTRRSS QNQHYHTSKI NYEEIHNTFL 250 260 270 280 290 300 LLSKLPTKRP LYNALRGASH LLKRVYVFPK GNDASSYVWV LILMEIPFLS RSLLSPGDDS 310 320 330 340 350 360 KAKSMIDVPE IKGLCYDILK RCIGILACIE SVGAINYITS WYANLPTAEF AKKVDLLNLY 370 380 390 400 410 420 ITFHLKKYFY IANNPHLLRR TSSTAAYNAS TSGSRTEDSH PTDREYSENV HIKEEIDAMN 430 440 450 460 470 480 QETPNFTNQL ALPTSYLGSF PARRNSKKNQ SQEAKIKIYQ YGNDWHIKTA AISLSFYLCA 490 500 510 520 530 540 NTYRVEKVSI ASFYNSLVDF VNIKLDFDSW QTNKKSKFNS SSGENDLQQV IDYINGSTRG 550 560 570 580 590 600 STLHENASYY FCQYPFLITL GGKISILEYE ARRQMERKAE EAFINSLDKR VALDIYFKVK 610 620 630 640 650 660 VRRENIVQDS ISAIKNNSNN LKKSLRVQFV NEPGVDVGGL KKEWFLLLTR ALFNPQAGMV 670 680 690 700 710 720 YNIEDSNYLW FNLVPIENFE MYYLLGAVLG LAIYNSTILD LHFPMALYKI LLDKPVGLDD 730 740 750 760 770 780 YKQLFPVSYG NLMKLKKYST EELLALDLTF EVSYQDLFGK TYSAELIKDG RKIFVTAETR 790 800 810 820 830 840 KSYIEKYTQF FLQEGIKKQI TAFSSGFKNV IGGNGLSLFL PEEIQLLLCG SEEGGIDVDV 850 860 870 880 890 900 LKSVTKYVGW KTPDDGADST VVQWFWEYMC EINTQERKRL LMFVTGSDRV PATGIQNLSF 910 920 930 940 950 KISSQGKDSN RLPVAHTCFN ELGLYNYSSK EKLVDKLVTA VNESAGFGLK

References

[1]

"Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis." Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A., Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.-S., Passoth V., Richardson P.M. Nat. Biotechnol. 25:319-326(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAVQ01000002 Genomic DNA. Translation: EAZ63068.2.
RefSeq	XP_001387091.2. XM_001387054.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	4924.PICST_66630.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4851749.
KEGG	pic:PICST_66630.
Phylogenomic databases
HOGENOM	HOG000246763.
KO	K12232.
OMA	NEPGIDA.
OrthoDB	EOG42Z7Z7.
Family and domain databases
InterPro	IPR000569. HECT. IPR005735. Znf_LSD1. [Graphical view]
Pfam	PF00632. HECT. 1 hit. [Graphical view]
SMART	SM00119. HECTc. 1 hit. [Graphical view]
SUPFAM	SSF56204. HECT. 1 hit.
TIGRFAMs	TIGR01053. LSD1. 1 hit.
PROSITE	PS50237. HECT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3GHK0_PICST

Accession

Primary (citable) accession number: A3GHK0

Entry history

Integrated into UniProtKB/TrEMBL:	April 3, 2007
Last sequence update:	June 16, 2009
Last modified:	April 3, 2013
This is version 43 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)