Unreviewed, UniProtKB/TrEMBL A3FGY8 (A3FGY8_9HIV1)

Names and origin

Protein names

Submitted name:
    Protease EMBL ABN55118.1

Gene names

Name:

pol EMBL ABN55118.1

Organism

Human immunodeficiency virus 1 EMBL ABN55118.1

Taxonomic identifier

11676 [NCBI]

Taxonomic lineage

Viruses › Retro-transcribing viruses › Retroviridae › Orthoretrovirinae › Lentivirus › Primate lentivirus group

Protein attributes

Sequence length	99 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 peptidase A2 domain. Spearmint SPM001995

Ontologies

Keywords
Molecular function	Aspartyl protease RuleBase RU000453V1 Spearmint SPM001969 Hydrolase Protease
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro
Molecular function	aspartic-type endopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL ABN55118.1
	Non-terminal residue	99	1	EMBL ABN55118.1

Sequences

	Sequence		Length	Mass (Da)
	A3FGY8-1 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 189F5EE42D82533D	FASTA	99	10,820
	10 20 30 40 50 60 PQITLWQRPL VTIKIGGQLK EALLDTGADD TVLEEMNLPG RWKPKMIGGI GGFIKVRQYD 70 80 90 QILIEICGHK AIGTVLVGPT PVNIIGRNLL TQIGCTLNF

References

[1]	"Use of peripheral blood DNA for genotype antiretroviral resistance testing in drug-naive HIV-infected subjects." Vicenti I., Razzolini F., Saladini F., Romano L., Zazzi M. Clin. Infect. Dis. 44:1657-1661(2007) [PubMed: 17516412] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	EF376444 Genomic RNA. Translation: ABN55118.1.
3D structure databases
SMR	A3FGY8. Positions 1-99.
ModBase	Search...
Family and domain databases
InterPro	IPR018061. Pept_A2A_retrovirus_sg. IPR001995. Peptidase_A2_cat. IPR001969. Peptidase_aspartic_AS. IPR009007. Peptidase_aspartic_catalytic. [Graphical view]
Gene3D	G3DSA:2.40.70.10. Pept_Aspartc_cat. 1 hit.
Pfam	PF00077. RVP. 1 hit. [Graphical view]
PROSITE	PS50175. ASP_PROT_RETROV. 1 hit. PS00141. ASP_PROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3FGY8_9HIV1

Accession

Primary (citable) accession number: A3FGY8

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	June 16, 2009
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)