A3DPG6 (A3DPG6_STAMF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABN70526.1

Gene names

Ordered Locus Names:

Smar_1436

Organism

Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) [Complete proteome] [HAMAP]

Taxonomic identifier

399550 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Staphylothermus › Staphylothermus marinus

Protein attributes

Sequence length	381 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABN70526.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3DPG6 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: AC79EC666FD2B103	FASTA	381	44,767
	10 20 30 40 50 60 MDENELVNKL SDALGIEYEK LSKHIGRSIR LMKYGELNYV VFRRDLLGYR EGTTILLGEE 70 80 90 100 110 120 PLIVHGYPSI QRLAFIEGVS KHMIDNVVVE EKMNGYNVRV VYYMNNIYAI TRGGYICPYT 130 140 150 160 170 180 TARIRKLYSK NIKLAYQEYP DTILVGEVVG TENPYVIYDY PEARGFDYFI FDTMKKDKLQ 190 200 210 220 230 240 PLRIRDEIAE KYSLKTVRIL DIINKRDIDR LKTIINRLEK ERREGVVLKD PYQRVPPLKY 250 260 270 280 290 300 TTIYINIRDI WEGMRYPFDE GRGYLFSRIV RLIAQGYEYD WNNTELDRIA LKLGRAILEP 310 320 330 340 350 360 AINSLKKRAN GEIIASKYTL VFPSEDDLSK YIEYAESIGM DFIFRVVEKR EDGCIVVELF 370 380 KMKETHNIYT KMLKTGYSPL D

References

[1]

"The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota." Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N. BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43588 / DSM 3639 / F1.

[2]

"Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1." Anderson I.J., Sun H., Lapidus A., Copeland A., Glavina Del Rio T., Tice H., Dalin E., Lucas S., Barry K., Land M., Richardson P., Huber H., Kyrpides N.C. Stand. Genomic Sci. 1:183-188(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43588 / DSM 3639 / F1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000575 Genomic DNA. Translation: ABN70526.1.
RefSeq	YP_001041434.1. NC_009033.1.
3D structure databases
ProteinModelPortal	A3DPG6.
ModBase	Search...
Protein-protein interaction databases
STRING	399550.Smar_1436.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABN70526; ABN70526; Smar_1436.
GeneID	4906715.
KEGG	smr:Smar_1436.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1423.
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
ProtClustDB	CLSK862643.
Enzyme and pathway databases
BioCyc	SMAR399550:GHK2-1481-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3DPG6_STAMF

Accession

Primary (citable) accession number: A3DPG6

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)