Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase

Gene

Smar_1436

Organism
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciSMAR399550:G1G8A-1543-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Smar_1436Imported
OrganismiStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)Imported
Taxonomic identifieri399550 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus
Proteomesi
  • UP000000254 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi399550.Smar_1436

Structurei

3D structure databases

ProteinModelPortaliA3DPG6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini86 – 233RNA_ligaseInterPro annotationAdd BLAST148

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

A3DPG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDENELVNKL SDALGIEYEK LSKHIGRSIR LMKYGELNYV VFRRDLLGYR
60 70 80 90 100
EGTTILLGEE PLIVHGYPSI QRLAFIEGVS KHMIDNVVVE EKMNGYNVRV
110 120 130 140 150
VYYMNNIYAI TRGGYICPYT TARIRKLYSK NIKLAYQEYP DTILVGEVVG
160 170 180 190 200
TENPYVIYDY PEARGFDYFI FDTMKKDKLQ PLRIRDEIAE KYSLKTVRIL
210 220 230 240 250
DIINKRDIDR LKTIINRLEK ERREGVVLKD PYQRVPPLKY TTIYINIRDI
260 270 280 290 300
WEGMRYPFDE GRGYLFSRIV RLIAQGYEYD WNNTELDRIA LKLGRAILEP
310 320 330 340 350
AINSLKKRAN GEIIASKYTL VFPSEDDLSK YIEYAESIGM DFIFRVVEKR
360 370 380
EDGCIVVELF KMKETHNIYT KMLKTGYSPL D
Length:381
Mass (Da):44,767
Last modified:March 20, 2007 - v1
Checksum:iAC79EC666FD2B103
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA Translation: ABN70526.1
RefSeqiWP_011839720.1, NC_009033.1

Genome annotation databases

EnsemblBacteriaiABN70526; ABN70526; Smar_1436
GeneIDi4906715
KEGGismr:Smar_1436

Similar proteinsi

Entry informationi

Entry nameiA3DPG6_STAMF
AccessioniPrimary (citable) accession number: A3DPG6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: March 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health