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A3DPG6

- A3DPG6_STAMF

UniProt

A3DPG6 - A3DPG6_STAMF

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Smar_1436

Organism
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMAR399550:GHK2-1489-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Smar_1436Imported
OrganismiStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)Imported
Taxonomic identifieri399550 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus
ProteomesiUP000000254: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi399550.Smar_1436.

Structurei

3D structure databases

ProteinModelPortaliA3DPG6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

A3DPG6 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDENELVNKL SDALGIEYEK LSKHIGRSIR LMKYGELNYV VFRRDLLGYR
60 70 80 90 100
EGTTILLGEE PLIVHGYPSI QRLAFIEGVS KHMIDNVVVE EKMNGYNVRV
110 120 130 140 150
VYYMNNIYAI TRGGYICPYT TARIRKLYSK NIKLAYQEYP DTILVGEVVG
160 170 180 190 200
TENPYVIYDY PEARGFDYFI FDTMKKDKLQ PLRIRDEIAE KYSLKTVRIL
210 220 230 240 250
DIINKRDIDR LKTIINRLEK ERREGVVLKD PYQRVPPLKY TTIYINIRDI
260 270 280 290 300
WEGMRYPFDE GRGYLFSRIV RLIAQGYEYD WNNTELDRIA LKLGRAILEP
310 320 330 340 350
AINSLKKRAN GEIIASKYTL VFPSEDDLSK YIEYAESIGM DFIFRVVEKR
360 370 380
EDGCIVVELF KMKETHNIYT KMLKTGYSPL D
Length:381
Mass (Da):44,767
Last modified:March 20, 2007 - v1
Checksum:iAC79EC666FD2B103
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000575 Genomic DNA. Translation: ABN70526.1.
RefSeqiYP_001041434.1. NC_009033.1.

Genome annotation databases

EnsemblBacteriaiABN70526; ABN70526; Smar_1436.
GeneIDi4906715.
KEGGismr:Smar_1436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000575 Genomic DNA. Translation: ABN70526.1 .
RefSeqi YP_001041434.1. NC_009033.1.

3D structure databases

ProteinModelPortali A3DPG6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 399550.Smar_1436.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABN70526 ; ABN70526 ; Smar_1436 .
GeneIDi 4906715.
KEGGi smr:Smar_1436.

Phylogenomic databases

eggNOGi COG1423.
HOGENOMi HOG000224394.
KOi K07468.
OMAi EEKMNGY.

Enzyme and pathway databases

BioCyci SMAR399550:GHK2-1489-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota."
    Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N.
    BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43588 / DSM 3639 / F1Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43588 / DSM 3639 / F1Imported.

Entry informationi

Entry nameiA3DPG6_STAMF
AccessioniPrimary (citable) accession number: A3DPG6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: October 29, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3