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A3DPG6

- A3DPG6_STAMF

UniProt

A3DPG6 - A3DPG6_STAMF

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Smar_1436

Organism
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSMAR399550:GHK2-1489-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Smar_1436Imported
    OrganismiStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)Imported
    Taxonomic identifieri399550 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus
    ProteomesiUP000000254: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi399550.Smar_1436.

    Structurei

    3D structure databases

    ProteinModelPortaliA3DPG6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1423.
    HOGENOMiHOG000224394.
    KOiK07468.
    OMAiEEKMNGY.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A3DPG6-1 [UniParc]FASTAAdd to Basket

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    MDENELVNKL SDALGIEYEK LSKHIGRSIR LMKYGELNYV VFRRDLLGYR    50
    EGTTILLGEE PLIVHGYPSI QRLAFIEGVS KHMIDNVVVE EKMNGYNVRV 100
    VYYMNNIYAI TRGGYICPYT TARIRKLYSK NIKLAYQEYP DTILVGEVVG 150
    TENPYVIYDY PEARGFDYFI FDTMKKDKLQ PLRIRDEIAE KYSLKTVRIL 200
    DIINKRDIDR LKTIINRLEK ERREGVVLKD PYQRVPPLKY TTIYINIRDI 250
    WEGMRYPFDE GRGYLFSRIV RLIAQGYEYD WNNTELDRIA LKLGRAILEP 300
    AINSLKKRAN GEIIASKYTL VFPSEDDLSK YIEYAESIGM DFIFRVVEKR 350
    EDGCIVVELF KMKETHNIYT KMLKTGYSPL D 381
    Length:381
    Mass (Da):44,767
    Last modified:March 20, 2007 - v1
    Checksum:iAC79EC666FD2B103
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000575 Genomic DNA. Translation: ABN70526.1.
    RefSeqiWP_011839720.1. NC_009033.1.
    YP_001041434.1. NC_009033.1.

    Genome annotation databases

    EnsemblBacteriaiABN70526; ABN70526; Smar_1436.
    GeneIDi4906715.
    KEGGismr:Smar_1436.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000575 Genomic DNA. Translation: ABN70526.1 .
    RefSeqi WP_011839720.1. NC_009033.1.
    YP_001041434.1. NC_009033.1.

    3D structure databases

    ProteinModelPortali A3DPG6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 399550.Smar_1436.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABN70526 ; ABN70526 ; Smar_1436 .
    GeneIDi 4906715.
    KEGGi smr:Smar_1436.

    Phylogenomic databases

    eggNOGi COG1423.
    HOGENOMi HOG000224394.
    KOi K07468.
    OMAi EEKMNGY.

    Enzyme and pathway databases

    BioCyci SMAR399550:GHK2-1489-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota."
      Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N.
      BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43588 / DSM 3639 / F1Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43588 / DSM 3639 / F1Imported.

    Entry informationi

    Entry nameiA3DPG6_STAMF
    AccessioniPrimary (citable) accession number: A3DPG6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3