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Protein
Submitted name:

Glycoside hydrolase, family 57

Gene

Smar_1407

Organism
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSMAR399550:GHK2-1460-MONOMER.

Protein family/group databases

CAZyiGH57. Glycoside Hydrolase Family 57.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase, family 57Imported
Gene namesi
Ordered Locus Names:Smar_1407Imported
OrganismiStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)Imported
Taxonomic identifieri399550 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus
Proteomesi
  • UP000000254 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi399550.Smar_1407.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini123 – 466344Glyco_hydro_57InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG03284. Archaea.
COG1449. LUCA.
HOGENOMiHOG000246318.
OMAiWHALDSD.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

A3DPD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVLDKYSSL IKPKLINNIE AYMVFDKPAH KPNAEAKIYV LLNNHGSRRD
60 70 80 90 100
IHYKIVSIDR NREVFSKRIN VDEKKFLIET ISIETPDKPG RFCYKLFIDN
110 120 130 140 150
EQIDNTCFLV GDPSSREQMY FTIVWHHHQA PNYLPDGRIH GPWAYIYVWS
160 170 180 190 200
DLLKPYGKGP YHYHSVMLNI HPHFKATYNL SPSLLRQWQI AVEKGVEFVN
210 220 230 240 250
GEKYDPNHEK IRLVEETLNN YREALFKGQI DVLTSIYAHT IGGFLTDVLG
260 270 280 290 300
ATNIVEEEIR YGKEVTSKIM GNNYNPQGIW TPEMAFSMKL IPIYYDLDIK
310 320 330 340 350
YTVLDDKFHF FHAEGNKDSQ YEPYMVIDTE SKKYITVFFR DHDLSDILGF
360 370 380 390 400
RNNFYSEPHA WRNAYEFALR VAEKWFDKNV KVLTIALDGE NWMSFSVNPP
410 420 430 440 450
LTAYFLDKMI IYLETLSDNK FIKLSTLREI YNKVPANRIL TNIPTNSWLG
460 470 480 490 500
TFRKWRGEVP QHEEYWIKTY SVYRKLLAYE EMIGGRDEFS NEARWALWHA
510 520 530 540 550
LDSDYWWAEF WLPKIIDTWL SVAENILNNR INKIQIIDVR PASEFYEDEK
560 570 580 590 600
AGLVVTIRNQ LEKEIRVSFA IGGTGFSSVN NDLETVKMNP NSSYTRIIPV
610 620 630
KAKFIGKHKM VVSAISKGLI IDSKIIDINV KPKLLPNPR
Length:639
Mass (Da):74,832
Last modified:March 20, 2007 - v1
Checksum:i62E23AE1DC44A50F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA. Translation: ABN70497.1.
RefSeqiWP_011839691.1. NC_009033.1.

Genome annotation databases

EnsemblBacteriaiABN70497; ABN70497; Smar_1407.
GeneIDi4907812.
KEGGismr:Smar_1407.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA. Translation: ABN70497.1.
RefSeqiWP_011839691.1. NC_009033.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399550.Smar_1407.

Protein family/group databases

CAZyiGH57. Glycoside Hydrolase Family 57.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN70497; ABN70497; Smar_1407.
GeneIDi4907812.
KEGGismr:Smar_1407.

Phylogenomic databases

eggNOGiarCOG03284. Archaea.
COG1449. LUCA.
HOGENOMiHOG000246318.
OMAiWHALDSD.

Enzyme and pathway databases

BioCyciSMAR399550:GHK2-1460-MONOMER.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota."
    Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N.
    BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43588 / DSM 3639 / JCM 9404 / F1Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43588 / DSM 3639 / JCM 9404 / F1Imported.

Entry informationi

Entry nameiA3DPD7_STAMF
AccessioniPrimary (citable) accession number: A3DPD7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: December 9, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.