A3DPC2 (A3DPC2_STAMF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 1 EMBL ABN70482.1

Gene names

Ordered Locus Names:

Smar_1391

Organism

Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) [Complete proteome] [HAMAP]

Taxonomic identifier

399550 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Staphylothermus

Protein attributes

Sequence length	421 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABN70482.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3DPC2 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: C7135BFB233F82B3	FASTA	421	49,926
	10 20 30 40 50 60 MIRFPDYFLF GTATSSHQIE GNNIFNDWWE WETKGRIKVR SGKACNHWEL YKEDIELMAE 70 80 90 100 110 120 LGYNAYRFSI EWSRIFPRKD HIDYESLNKY KEIVNLLRKY GIEPVITLHH FTNPQWFMKI 130 140 150 160 170 180 GGWTREENIK YFIKYVELIA SEIKDVKIWI TINEPIIYVL QGYISGEWPP GIKNLKIADQ 190 200 210 220 230 240 VTKNLLKAHN EAYNILHKHG IVGIAKNMIA FKPGSNRGKD INIYHKVDKA FNWGFLNGIL 250 260 270 280 290 300 RGELETLRGK YRVEPGNIDF IGINYYSSYI VKYTWNPFKL HIKVEPLDTG LWTTMGYCIY 310 320 330 340 350 360 PRGIYEVVMK THEKYGKEII ITENGVAVEN DELRILSIIR HLQYLYKAMN EGAKVKGYFY 370 380 390 400 410 420 WSFMDNFEWD KGFNQRFGLV EVDYKTFERK PRKSAYVYSQ IARTKTISDE YLEKYGLKNL E

References

[1]

"Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1." Anderson I.J., Sun H., Lapidus A., Copeland A., Glavina Del Rio T., Tice H., Dalin E., Lucas S., Barry K., Land M., Richardson P., Huber H., Kyrpides N.C. Stand. Genomic Sci. 1:183-188(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota." Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N. BMC Genomics 10:145-145(2009) [PubMed: 19341479] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000575 Genomic DNA. Translation: ABN70482.1.
RefSeq	YP_001041390.1. NC_009033.1.
3D structure databases
ProteinModelPortal	A3DPC2.
SMR	A3DPC2. Positions 2-421.
ModBase	Search...
Protein-protein interaction databases
STRING	A3DPC2.
Protein family/group databases
CAZy	GH1. Glycoside Hydrolase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4906851.
GenomeReviews	Gene locus Smar_1391 in contig CP000575_GR.
KEGG	smr:Smar_1391.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04026.
HOGENOM	HBG316462.
OMA	ACNHWEL.
ProtClustDB	CLSK689645.
Enzyme and pathway databases
BioCyc	SMAR399550:SMAR_1391-MONOMER.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01188.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 1 hit. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3DPC2_STAMF

Accession

Primary (citable) accession number: A3DPC2

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	November 16, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)