Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A3DPC0 (A3DPC0_STAMF) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.2.1.1 EMBL ABN70480.1
Gene names
Ordered Locus Names:Smar_1389 EMBL ABN70480.1
OrganismStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) [Complete proteome] [HAMAP] EMBL ABN70480.1
Taxonomic identifier399550 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus

Protein attributes

Sequence length516 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ABN70480.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3DPC0 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 4F9EBC0468FCDD07

FASTA51660,364
        10         20         30         40         50         60 
MSDIVFMFEV HQPYRLDRNA YNKLLEKALR GRLEPHDLED AIFDNGLNKL VIERASTKCY 

        70         80         90        100        110        120 
IPATKIILEN IKRYANSNKP FKVAYSISGV FIEQVRMWKP EVIDLFMELR ETGMVEFVEQ 

       130        140        150        160        170        180 
TYYHSMAAFM PLKDWSELRE QILEHRRAMK ELFDYEPKSI ENTEFSYNND IAWLFSSMGY 

       190        200        210        220        230        240 
KVVLTEGVDW VLGWRSPNYV YRAYGSDIKV LTRNYRLSDD IGYRFSDRNW DQYPLTADKY 

       250        260        270        280        290        300 
ASWLAATPGD VIFLAMDYET FGEHHWPETG IHEFLRWLPG EILKYNHLYT STPSEVVDKY 

       310        320        330        340        350        360 
PARDIIDVPP WNTISWADER DLSAWLGNHM QRNAFKILVD LRPYVKALDE PEITRIWKLL 

       370        380        390        400        410        420 
TISDHLYYIA TKFGSIEQVH SYFSPYKNAP DAYAIYVQAL SLLAGLIAEK IEQKKYDVAR 

       430        440        450        460        470        480 
KLVLPMNKAF YFYKPTGEYT GYSATNIKEF LEIISKAPAE SILYHLKRGD FQAWLRSIFG 

       490        500        510 
LDEIADELDK ISSQPLSAEE ARKAVSDIIR KFLSST 

« Hide

References

[1]"The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota."
Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N.
BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43588 / DSM 3639 / F1.
[2]"Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1."
Anderson I.J., Sun H., Lapidus A., Copeland A., Glavina Del Rio T., Tice H., Dalin E., Lucas S., Barry K., Land M., Richardson P., Huber H., Kyrpides N.C.
Stand. Genomic Sci. 1:183-188(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43588 / DSM 3639 / F1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000575 Genomic DNA. Translation: ABN70480.1.
RefSeqYP_001041388.1. NC_009033.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING399550.Smar_1389.

Protein family/group databases

CAZyGH57. Glycoside Hydrolase Family 57.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN70480; ABN70480; Smar_1389.
GeneID4907151.
KEGGsmr:Smar_1389.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1449.
HOGENOMHOG000224113.
KOK07405.
OMAFEVHQPY.

Enzyme and pathway databases

BioCycSMAR399550:GHK2-1442-MONOMER.

Family and domain databases

Gene3D3.20.110.10. 1 hit.
InterProIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMSSF88713. SSF88713. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3DPC0_STAMF
AccessionPrimary (citable) accession number: A3DPC0
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)