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Protein
Submitted name:

Glycyl-tRNA synthetase

Gene

Smar_1134

Organism
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseImported, Ligase

Enzyme and pathway databases

BioCyciSMAR399550:GHK2-1173-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycyl-tRNA synthetaseImported (EC:6.1.1.14Imported)
Gene namesi
Ordered Locus Names:Smar_1134Imported
OrganismiStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)Imported
Taxonomic identifieri399550 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus
ProteomesiUP000000254 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi399550.Smar_1134.

Structurei

3D structure databases

ProteinModelPortaliA3DNL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0423.
HOGENOMiHOG000242015.
KOiK01880.
OMAiFGVTQIG.

Family and domain databases

Gene3Di3.40.50.800. 1 hit.
InterProiIPR002314. aa-tRNA-synt_IIb_cons-dom.
IPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR027031. Gly-tRNA_synthase/POLG2.
IPR002315. tRNA-synt_gly.
[Graphical view]
PANTHERiPTHR10745. PTHR10745. 1 hit.
PfamiPF03129. HGTP_anticodon. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
[Graphical view]
PRINTSiPR01043. TRNASYNTHGLY.
SUPFAMiSSF52954. SSF52954. 1 hit.
TIGRFAMsiTIGR00389. glyS_dimeric. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3DNL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNKQVDKYQ ILLDLGKRRG LFWLSYEIYG GVAGFYDFGP NGVLIKRNII
60 70 80 90 100
NEWLNNLVYN TGLVLEIETP IITPRIVLKA SGHEDHFTDP ITECTRCGRV
110 120 130 140 150
FRADHLIEEA LGIRAEGLSM DELWKLIKEH NIRCPECGGE LTKPKPALLL
160 170 180 190 200
FKTEIGPYKG SPAYLRPETA QGMFVSFKHV LNIARNKLPL GIAQIGRVGR
210 220 230 240 250
NEISPRQGLL RLREFTIMEL EFFFDPEKAF EETMKYMTDE IRNEKLNIIT
260 270 280 290 300
AEDKLRGEEK TRKYTAIELI ENKIVKNPWM AYWMALGNIF LRKLGISSEK
310 320 330 340 350
IRFDEKLPEE KAHYSEQTFD QEVYTEKYGW IEVAGYSYRT TYDLSRHIKY
360 370 380 390 400
SKADLTYFKK YDKPIKKKIV KIVPNPKKIR EIVGKDIGTV MKKLNEIPAE
410 420 430 440 450
KILEELNKNN YVEISNYKLS RECFIISEKE ETIHGEKIIP HVVEPSFGLE
460 470 480 490 500
RIFYVVLENS ISIARDGRIV LKLPPRIAPY KVAVFPLVTG NKPEHKKMVS
510 520 530 540 550
IARQVYRALL ENNILAYYDE EGSIGRRYAR ADEIGIPYAI TIDYQTLEDE
560 570 580
TVTLRDRDSR EQIRLHIQEL HDKLISLLGL KKEFNIEF
Length:588
Mass (Da):68,350
Last modified:March 20, 2007 - v1
Checksum:iBD5CA2948C21AEFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA. Translation: ABN70229.1.
RefSeqiWP_011839420.1. NC_009033.1.
YP_001041137.1. NC_009033.1.

Genome annotation databases

EnsemblBacteriaiABN70229; ABN70229; Smar_1134.
GeneIDi4906816.
KEGGismr:Smar_1134.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA. Translation: ABN70229.1.
RefSeqiWP_011839420.1. NC_009033.1.
YP_001041137.1. NC_009033.1.

3D structure databases

ProteinModelPortaliA3DNL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399550.Smar_1134.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN70229; ABN70229; Smar_1134.
GeneIDi4906816.
KEGGismr:Smar_1134.

Phylogenomic databases

eggNOGiCOG0423.
HOGENOMiHOG000242015.
KOiK01880.
OMAiFGVTQIG.

Enzyme and pathway databases

BioCyciSMAR399550:GHK2-1173-MONOMER.

Family and domain databases

Gene3Di3.40.50.800. 1 hit.
InterProiIPR002314. aa-tRNA-synt_IIb_cons-dom.
IPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR027031. Gly-tRNA_synthase/POLG2.
IPR002315. tRNA-synt_gly.
[Graphical view]
PANTHERiPTHR10745. PTHR10745. 1 hit.
PfamiPF03129. HGTP_anticodon. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
[Graphical view]
PRINTSiPR01043. TRNASYNTHGLY.
SUPFAMiSSF52954. SSF52954. 1 hit.
TIGRFAMsiTIGR00389. glyS_dimeric. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota."
    Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N.
    BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43588 / DSM 3639 / F1Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43588 / DSM 3639 / F1Imported.

Entry informationi

Entry nameiA3DNL9_STAMF
AccessioniPrimary (citable) accession number: A3DNL9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: May 27, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.