A3DNC8 (RL30_STAMF) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L30P

Gene names

Name:	rpl30p
Ordered Locus Names:	Smar_1040

Organism

Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) [Complete proteome] [HAMAP]

Taxonomic identifier

399550 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Desulfurococcaceae › Staphylothermus › Staphylothermus marinus

Protein attributes

Sequence length	162 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit By similarity.
Sequence similarities	Belongs to the ribosomal protein L30P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 162	162	50S ribosomal protein L30P HAMAP-Rule MF_01371		PRO_1000087270

Sequences

	Sequence		Length	Mass (Da)
	A3DNC8 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: D89C2D0DBB6D478E	FASTA	162	18,714
	10 20 30 40 50 60 MPDLYAIIRI RGRLDVPPDV DYTLKLLRLH KKFHMVIYPS NQPGLKGMLQ KAKDWITWGE 70 80 90 100 110 120 INYETLVELL RKRGRTLGNK PLTDEFVDKY LSKYGIYGGI QGLAKALLEG KIKLHKLEVI 130 140 150 160 KPVFRLHPPR GGFKRSTKRP FNDGGELGYR GKSINELIKR ML

References

[1]

"The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota." Anderson I.J., Dharmarajan L., Rodriguez J., Hooper S., Porat I., Ulrich L.E., Elkins J.G., Mavromatis K., Sun H., Land M., Lapidus A., Lucas S., Barry K., Huber H., Zhulin I.B., Whitman W.B., Mukhopadhyay B., Woese C., Bristow J., Kyrpides N. BMC Genomics 10:145-145(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43588 / DSM 3639 / F1.

[2]

"Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1." Anderson I.J., Sun H., Lapidus A., Copeland A., Glavina Del Rio T., Tice H., Dalin E., Lucas S., Barry K., Land M., Richardson P., Huber H., Kyrpides N.C. Stand. Genomic Sci. 1:183-188(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43588 / DSM 3639 / F1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000575 Genomic DNA. Translation: ABN70138.1.
RefSeq	YP_001041046.1. NC_009033.1.
3D structure databases
ProteinModelPortal	A3DNC8.
ModBase	Search...
Protein-protein interaction databases
STRING	399550.Smar_1040.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABN70138; ABN70138; Smar_1040.
GeneID	4906940.
KEGG	smr:Smar_1040.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1841.
HOGENOM	HOG000170918.
KO	K02907.
OMA	RIRGRVN.
ProtClustDB	PRK06049.
Enzyme and pathway databases
BioCyc	SMAR399550:GHK2-1085-MONOMER.
Family and domain databases
Gene3D	1.10.15.30. 1 hit. 3.30.1390.20. 2 hits.
HAMAP	MF_01371_A. Ribosomal_L30_A.
InterPro	IPR005997. Ribosomal_L30_arc. IPR023106. Ribosomal_L30_central_dom_arc. IPR016082. Ribosomal_L30_ferredoxin-like. [Graphical view]
Pfam	PF00327. Ribosomal_L30. 1 hit. [Graphical view]
SUPFAM	SSF55129. Ribosomal_L30. 1 hit.
TIGRFAMs	TIGR01309. L30P_arch. 1 hit.
PROSITE	PS00634. RIBOSOMAL_L30. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL30_STAMF

Accession

Primary (citable) accession number: A3DNC8

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	March 20, 2007
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program