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Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:Smar_0830
OrganismiStaphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Taxonomic identifieri399550 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeStaphylothermus
Proteomesi
  • UP000000254 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000506431 – 21630S ribosomal protein S6eAdd BLAST216

Interactioni

Protein-protein interaction databases

STRINGi399550.Smar_0830.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000009829.
KOiK02991.
OMAiFRARAWQ.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3DMS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADFKIVISD PQAPKEETVV KVKVVGDPEI KFDENVKEGF ELPILKMNSK
60 70 80 90 100
TAEKIKAVHG VATIRMYKPG TKDKVKITGK IIVDDNIPEN EVRVNAEQLV
110 120 130 140 150
NATGTNELEG ELFRARAWQI RINDDRTKLL IGLKIGDEFD GSIVGLKNVK
160 170 180 190 200
LKIRGGSDNS GFPMRPDVMG GVKKRVLLSG PPGFHPREKG ERRRKMIRGN
210
TITEDIVQIN TVIKYV
Length:216
Mass (Da):24,100
Last modified:March 20, 2007 - v1
Checksum:i01BB4EFBAC0ABD41
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA. Translation: ABN69931.1.
RefSeqiWP_011839122.1. NC_009033.1.

Genome annotation databases

EnsemblBacteriaiABN69931; ABN69931; Smar_0830.
GeneIDi4907496.
KEGGismr:Smar_0830.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000575 Genomic DNA. Translation: ABN69931.1.
RefSeqiWP_011839122.1. NC_009033.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399550.Smar_0830.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN69931; ABN69931; Smar_0830.
GeneIDi4907496.
KEGGismr:Smar_0830.

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000009829.
KOiK02991.
OMAiFRARAWQ.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS6E_STAMF
AccessioniPrimary (citable) accession number: A3DMS1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 20, 2007
Last modified: November 2, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.