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A3DJ82 (A3DJ82_CLOTH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase family 9 EMBL ABN54011.1
Gene names
Ordered Locus Names:Cthe_2812
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length611 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABN54011.1
   Molecular functionHydrolase EMBL ABN54011.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpolysaccharide catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3636 Potential EMBL ABN54011.1
Chain37 – 611575 Potential EMBL ABN54011.1
PRO_5000225388

Sequences

Sequence LengthMass (Da)Tools
A3DJ82 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 7D8CA98FACF91A32

FASTA61168,511
        10         20         30         40         50         60 
MRKNLFAKRA VAFLLGIVIT AAGIVSFNTV STSAAGEYNY AKALQYSMFF YDANMCGTGV 

        70         80         90        100        110        120 
DENSLLSWRG DCHVYDARLP LDSQNTNMSD GFISSNRSVL DPDGDGKVDV SGGFHDAGDH 

       130        140        150        160        170        180 
VKFGLPEAYA ASTVGWGYYE FKDQFRATGQ AVHAEVILRY FNDYFMRCTF RDASGNVVAF 

       190        200        210        220        230        240 
CHQVGDGDID HAFWGAPEND TMFRRGWFIT KEKPGTDIIS ATAASLAINY MNFKDTDPQY 

       250        260        270        280        290        300 
AAKSLDYAKA LFDFAEKNPK GVVQGEDGPK GYYGSSKWQD DYCWAAAWLY LATQNEHYLD 

       310        320        330        340        350        360 
EAFKYYDYYA PPGWIHCWND VWSGTACILA EINDLYDKDS QNFEDRYKRA SNKNQWEQID 

       370        380        390        400        410        420 
FWKPIQDLLD KWSGGGITVT PGGYVFLNQW GSARYNTAAQ LIALVYDKHH GDTPSKYANW 

       430        440        450        460        470        480 
ARSQMDYLLG KNPLNRCYVV GYSSNSVKYP HHRAASGLKD ANDSSPHKYV LYGALVGGPD 

       490        500        510        520        530        540 
ASDQHVDRTN DYIYNEVAID YNAAFVGACA GLYRFFGDSS MQIDPSMPSH NVPVPPTPTP 

       550        560        570        580        590        600 
PDTQIVYGDL NGDQKVTSTD YTMLKRYLMK SIDRFNTSEQ AADLNRDGKI NSTDLTILKR 

       610 
YLLYSIPSLP I

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References

[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000568 Genomic DNA. Translation: ABN54011.1.
RefSeqYP_001039204.1. NC_009012.1.

3D structure databases

ProteinModelPortalA3DJ82.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3DJ82.

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4809649.
GenomeReviewsGene locus Cthe_2812 in contig CP000568_GR.
KEGGcth:Cthe_2812.
NMPDRfig|203119.1.peg.3490.
PATRIC19519682. VBICloThe47081_2994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG05134.
HOGENOMHBG746347.
OMAANDSSPH.
ProtClustDBCLSK734823.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR016134. Cellulos_enz_dockerin_1.
IPR002105. Cellulos_enz_dockerin_1_Ca-bd.
IPR018242. Dockerin_1.
IPR018247. EF_Hand_1_Ca_BS.
IPR001701. Glyco_hydro_9.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit.
PfamPF00404. Dockerin_1. 2 hits.
PF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF63446. Cellulos_enz_dockerin_1. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
PROSITEPS00448. CLOS_CELLULOSOME_RPT. 1 hit.
PS00018. EF_HAND_1. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3DJ82_CLOTH
AccessionPrimary (citable) accession number: A3DJ82
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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