Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A3DJ37 (A3DJ37_CLOTH) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Cthe_2767 EMBL ABN53966.1
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP] EMBL ABN53966.1
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
A3DJ37 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 6BAD46C5FAA7D220

FASTA46553,576
        10         20         30         40         50         60 
MILTITYTQP PATDLGYLLH KNPSRPQTFE LNHGKAHIFY PEATSERCTV ALLLDIDPID 

        70         80         90        100        110        120 
LARGKKGSSG EGGLFDYVND RPYVSSSFMS VAISRVFGTA MSGKCKEKPE LAAIKLPLKA 

       130        140        150        160        170        180 
KIMMLPCKGG EEIIYRLFEP LGYKVDVEGY MLDEKFPEWG KSRYYTVSLE GEVRVRDLLN 

       190        200        210        220        230        240 
HIYVLIPVLD SEKHYWVGED EIDKLFQHGE GWLVDHPEKE LITGRYLIRK KRLVNQALKR 

       250        260        270        280        290        300 
LLEASDVVDD ENEDDEPLKN EETEKKLNLN QQRLGTVVAV LKSVNAKKVI DLGCGEGNLL 

       310        320        330        340        350        360 
SLLLKDKSFE QITGVDVSYS VLERAKDRLK IDRLPEMQRK RISLFQSSLV YRDKRFSGYD 

       370        380        390        400        410        420 
AATVIEVIEH LDENRLQAFE KVLFEFTRPQ TVIVSTPNKE YNFHYQNLFE GNLRHRDHRF 

       430        440        450        460 
EWTRKEFETW AVKVAEKYGY SVRFLQIGEI DDEFGSPTQM GVFTL 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.
[2]"Structural and biochemical insights into 2'-O-methylation at the 3'-terminal nucleotide of RNA by Hen1."
Mui Chan C., Zhou C., Brunzelle J.S., Huang R.H.
Proc. Natl. Acad. Sci. U.S.A. 106:17699-17704(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 258-465.
[3]"Molecular basis of bacterial protein Hen1 activating the ligase activity of bacterial protein Pnkp for RNA repair."
Wang P., Chan C.M., Christensen D., Zhang C., Selvadurai K., Huang R.H.
Proc. Natl. Acad. Sci. U.S.A. 109:13248-13253(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 1-230.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000568 Genomic DNA. Translation: ABN53966.1.
RefSeqYP_001039159.1. NC_009012.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3JWGX-ray1.90A258-465[»]
3JWIX-ray2.20A/B259-465[»]
4DQZX-ray2.30A/B1-230[»]
4DRFX-ray2.60B/D1-230[»]
4E6NX-ray2.39B/D1-230[»]
ProteinModelPortalA3DJ37.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-60068N.
STRING203119.Cthe_2767.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN53966; ABN53966; Cthe_2767.
GeneID4810084.
KEGGcth:Cthe_2767.
PATRIC19519586. VBICloThe47081_2946.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG77126.
HOGENOMHOG000245785.
OMAQYVNDRP.
OrthoDBEOG6GFGH8.
ProtClustDBCLSK896035.

Enzyme and pathway databases

BioCycCTHE203119:GIW8-2868-MONOMER.

Family and domain databases

InterProIPR024026. 3'-RNA_MeTfrase_Hen1_bac.
IPR026610. Hen1.
IPR024740. Hen1_N.
[Graphical view]
PANTHERPTHR21404. PTHR21404. 1 hit.
PfamPF12623. Hen1_L. 1 hit.
[Graphical view]
TIGRFAMsTIGR04074. bacter_Hen1. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceA3DJ37.

Entry information

Entry nameA3DJ37_CLOTH
AccessionPrimary (citable) accession number: A3DJ37
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: November 13, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)