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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

Cthe_2166

Organism
Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCTHE203119:GIW8-2231-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Cthe_2166Imported
OrganismiClostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)Imported
Taxonomic identifieri203119 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
ProteomesiUP000002145: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi203119.Cthe_2166.

Structurei

3D structure databases

ProteinModelPortaliA3DHD9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000245679.
OMAiHYAPNEV.
OrthoDBiEOG6VTJXR.

Family and domain databases

InterProiIPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50113. PAC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3DHD9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDALNNKLYF IDSTKHKIFV EQIINGMHDW VRVIDINDNI IFVNESMAKA
60 70 80 90 100
LGKNVIGEKC YKAIGKSEPC ENCTSRKAVF EGTIQAKEEI IGDRIFSVKS
110 120 130 140 150
SPIRDENGQI TAVVEVLRDI TEMKKMQKKI LEHNQKLQSE LNMARRLQCS
160 170 180 190 200
LLPKELPQDK IDFSYVYRPC EAIGGDFLDI FKIDDEHIGI YIADVSGHGV
210 220 230 240 250
PASMLTVFLR SSINKKTLSP AEALNQLYKE FNRDYYDQEL YITIFYAIID
260 270 280 290 300
TKNKNIIYSN AGHNASPVLF NHESHRFDIL RIPGVPISDW VDNPEYTEKS
310 320 330 340 350
ISIEKGDRLF MYTDGIVELR NNKGEQFGEE RLLNILLGEK MPPAMTLDRI
360 370
IEAAMEFANI KNFNKIIDDI TMALLEIL
Length:378
Mass (Da):43,283
Last modified:March 20, 2007 - v1
Checksum:i2D31344755016150
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000568 Genomic DNA. Translation: ABN53368.1.
RefSeqiYP_001038561.1. NC_009012.1.

Genome annotation databases

EnsemblBacteriaiABN53368; ABN53368; Cthe_2166.
GeneIDi4810879.
KEGGicth:Cthe_2166.
PATRICi19518270. VBICloThe47081_2306.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000568 Genomic DNA. Translation: ABN53368.1.
RefSeqiYP_001038561.1. NC_009012.1.

3D structure databases

ProteinModelPortaliA3DHD9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi203119.Cthe_2166.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN53368; ABN53368; Cthe_2166.
GeneIDi4810879.
KEGGicth:Cthe_2166.
PATRICi19518270. VBICloThe47081_2306.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000245679.
OMAiHYAPNEV.
OrthoDBiEOG6VTJXR.

Enzyme and pathway databases

BioCyciCTHE203119:GIW8-2231-MONOMER.

Family and domain databases

InterProiIPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50113. PAC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372Imported.

Entry informationi

Entry nameiA3DHD9_CLOTH
AccessioniPrimary (citable) accession number: A3DHD9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: January 7, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.