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A3DHD9 (A3DHD9_CLOTH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Cthe_2166 EMBL ABN53368.1
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP] EMBL ABN53368.1
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionphosphorelay sensor kinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3DHD9 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 2D31344755016150

FASTA37843,283
        10         20         30         40         50         60 
MDALNNKLYF IDSTKHKIFV EQIINGMHDW VRVIDINDNI IFVNESMAKA LGKNVIGEKC 

        70         80         90        100        110        120 
YKAIGKSEPC ENCTSRKAVF EGTIQAKEEI IGDRIFSVKS SPIRDENGQI TAVVEVLRDI 

       130        140        150        160        170        180 
TEMKKMQKKI LEHNQKLQSE LNMARRLQCS LLPKELPQDK IDFSYVYRPC EAIGGDFLDI 

       190        200        210        220        230        240 
FKIDDEHIGI YIADVSGHGV PASMLTVFLR SSINKKTLSP AEALNQLYKE FNRDYYDQEL 

       250        260        270        280        290        300 
YITIFYAIID TKNKNIIYSN AGHNASPVLF NHESHRFDIL RIPGVPISDW VDNPEYTEKS 

       310        320        330        340        350        360 
ISIEKGDRLF MYTDGIVELR NNKGEQFGEE RLLNILLGEK MPPAMTLDRI IEAAMEFANI 

       370 
KNFNKIIDDI TMALLEIL 

« Hide

References

[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000568 Genomic DNA. Translation: ABN53368.1.
RefSeqYP_001038561.1. NC_009012.1.

3D structure databases

ProteinModelPortalA3DHD9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203119.Cthe_2166.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN53368; ABN53368; Cthe_2166.
GeneID4810879.
KEGGcth:Cthe_2166.
PATRIC19518270. VBICloThe47081_2306.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
HOGENOMHOG000245679.
OMATNDFVTM.
OrthoDBEOG6VTJXR.

Enzyme and pathway databases

BioCycCTHE203119:GIW8-2231-MONOMER.

Family and domain databases

InterProIPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50113. PAC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3DHD9_CLOTH
AccessionPrimary (citable) accession number: A3DHD9
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)