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A3DFL1

- A3DFL1_CLOTH

UniProt

A3DFL1 - A3DFL1_CLOTH

Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Cthe_1512

Organism
Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Enzyme and pathway databases

    BioCyciCTHE203119:GIW8-1566-MONOMER.

    Protein family/group databases

    REBASEi14743. CthORF1513P.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
    Gene namesi
    Ordered Locus Names:Cthe_1512Imported
    OrganismiClostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)Imported
    Taxonomic identifieri203119 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
    ProteomesiUP000002145: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi203119.Cthe_1512.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG12396.
    HOGENOMiHOG000244578.
    KOiK01155.
    OMAiTNYYGGG.
    OrthoDBiEOG60KN76.

    Family and domain databases

    InterProiIPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view]
    PfamiPF04556. DpnII. 1 hit.
    [Graphical view]
    PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A3DFL1-1 [UniParc]FASTAAdd to Basket

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    MKYSEIFKKR LGCKNTDEVF NYLLSHMKET IKGWDFFVAW EKVMNKVGSV    50
    EVVLNILNYL VGKENVVEEF KMLLGRYPEI AEVLPALLAL REKSIKVVEP 100
    LADNVFNYKE YVFRKKKKYN PEEIEMLAEF AEKTGLLAMF EKKNIKSVVD 150
    YAIGVEVGLD TNARKNRSGT AMEMITELFV KKICSMNNYR YLSQATSHKI 200
    KTSFGYNVSV DKSERSFDFA IDNGHKLYLV ETNYYGGGGS KLKSVAGEFT 250
    TLFSFIKKET PEHGFIWITD GKGWETAKKP LRESFDKVDY VLNLDMVQKG 300
    ILEDIILQGL 310
    Length:310
    Mass (Da):35,620
    Last modified:March 20, 2007 - v1
    Checksum:i948AC69B9E2CC019
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000568 Genomic DNA. Translation: ABN52740.1.
    RefSeqiWP_004463892.1. NC_009012.1.
    YP_001037933.1. NC_009012.1.

    Genome annotation databases

    EnsemblBacteriaiABN52740; ABN52740; Cthe_1512.
    GeneIDi4810550.
    KEGGicth:Cthe_1512.
    PATRICi19516845. VBICloThe47081_1602.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000568 Genomic DNA. Translation: ABN52740.1 .
    RefSeqi WP_004463892.1. NC_009012.1.
    YP_001037933.1. NC_009012.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 203119.Cthe_1512.

    Protein family/group databases

    REBASEi 14743. CthORF1513P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABN52740 ; ABN52740 ; Cthe_1512 .
    GeneIDi 4810550.
    KEGGi cth:Cthe_1512.
    PATRICi 19516845. VBICloThe47081_1602.

    Phylogenomic databases

    eggNOGi NOG12396.
    HOGENOMi HOG000244578.
    KOi K01155.
    OMAi TNYYGGG.
    OrthoDBi EOG60KN76.

    Enzyme and pathway databases

    BioCyci CTHE203119:GIW8-1566-MONOMER.

    Family and domain databases

    InterProi IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view ]
    Pfami PF04556. DpnII. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372Imported.

    Entry informationi

    Entry nameiA3DFL1_CLOTH
    AccessioniPrimary (citable) accession number: A3DFL1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3