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A3DFL1 (A3DFL1_CLOTH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.21.4 EMBL ABN52740.1
Gene names
Ordered Locus Names:Cthe_1512 EMBL ABN52740.1
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP] EMBL ABN52740.1
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length310 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABN52740.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA restriction-modification system

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Type II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A3DFL1 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 948AC69B9E2CC019

FASTA31035,620
        10         20         30         40         50         60 
MKYSEIFKKR LGCKNTDEVF NYLLSHMKET IKGWDFFVAW EKVMNKVGSV EVVLNILNYL 

        70         80         90        100        110        120 
VGKENVVEEF KMLLGRYPEI AEVLPALLAL REKSIKVVEP LADNVFNYKE YVFRKKKKYN 

       130        140        150        160        170        180 
PEEIEMLAEF AEKTGLLAMF EKKNIKSVVD YAIGVEVGLD TNARKNRSGT AMEMITELFV 

       190        200        210        220        230        240 
KKICSMNNYR YLSQATSHKI KTSFGYNVSV DKSERSFDFA IDNGHKLYLV ETNYYGGGGS 

       250        260        270        280        290        300 
KLKSVAGEFT TLFSFIKKET PEHGFIWITD GKGWETAKKP LRESFDKVDY VLNLDMVQKG 

       310 
ILEDIILQGL 

« Hide

References

[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000568 Genomic DNA. Translation: ABN52740.1.
RefSeqYP_001037933.1. NC_009012.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203119.Cthe_1512.

Protein family/group databases

REBASE14743. CthORF1513P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN52740; ABN52740; Cthe_1512.
GeneID4810550.
KEGGcth:Cthe_1512.
PATRIC19516845. VBICloThe47081_1602.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG12396.
HOGENOMHOG000244578.
KOK01155.
OMARKNRGGH.
OrthoDBEOG60KN76.
ProtClustDBCLSK2747636.

Enzyme and pathway databases

BioCycCTHE203119:GIW8-1566-MONOMER.

Family and domain databases

InterProIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3DFL1_CLOTH
AccessionPrimary (citable) accession number: A3DFL1
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)