A3DFL1 (A3DFL1_CLOTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type II site-specific deoxyribonuclease EMBL ABN52740.1
EC=3.1.21.4 EMBL ABN52740.1

Gene names

Ordered Locus Names:

Cthe_1512

Organism

Clostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP] EMBL ABN52740.1

Taxonomic identifier

203119 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium thermocellum

Protein attributes

Sequence length	310 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABN52740.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro Type II site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3DFL1 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 948AC69B9E2CC019	FASTA	310	35,620
	10 20 30 40 50 60 MKYSEIFKKR LGCKNTDEVF NYLLSHMKET IKGWDFFVAW EKVMNKVGSV EVVLNILNYL 70 80 90 100 110 120 VGKENVVEEF KMLLGRYPEI AEVLPALLAL REKSIKVVEP LADNVFNYKE YVFRKKKKYN 130 140 150 160 170 180 PEEIEMLAEF AEKTGLLAMF EKKNIKSVVD YAIGVEVGLD TNARKNRSGT AMEMITELFV 190 200 210 220 230 240 KKICSMNNYR YLSQATSHKI KTSFGYNVSV DKSERSFDFA IDNGHKLYLV ETNYYGGGGS 250 260 270 280 290 300 KLKSVAGEFT TLFSFIKKET PEHGFIWITD GKGWETAKKP LRESFDKVDY VLNLDMVQKG 310 ILEDIILQGL

References

[1]

"Complete sequence of Clostridium thermocellum ATCC 27405." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000568 Genomic DNA. Translation: ABN52740.1.
RefSeq	YP_001037933.1. NC_009012.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	203119.Cthe_1512.
Protein family/group databases
REBASE	14743. CthORF1513P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABN52740; ABN52740; Cthe_1512.
GeneID	4810550.
KEGG	cth:Cthe_1512.
PATRIC	19516845. VBICloThe47081_1602.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG12396.
HOGENOM	HOG000244578.
KO	K01155.
OMA	TNARKNR.
ProtClustDB	CLSK2747636.
Enzyme and pathway databases
BioCyc	CTHE203119:GIW8-1566-MONOMER.
Family and domain databases
InterPro	IPR021191. Restrct_endonuc_II_DpmII. IPR007637. Restrct_endonuc_II_DpmII-like. [Graphical view]
Pfam	PF04556. DpnII. 1 hit. [Graphical view]
PIRSF	PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3DFL1_CLOTH

Accession

Primary (citable) accession number: A3DFL1

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)