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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Cthe_1512

Organism
Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciCTHE203119:GIW8-1566-MONOMER.

Protein family/group databases

REBASEi14743. CthORF1513P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Cthe_1512Imported
OrganismiClostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)Imported
Taxonomic identifieri203119 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
ProteomesiUP000002145: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi203119.Cthe_1512.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.

Sequencei

Sequence statusi: Complete.

A3DFL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYSEIFKKR LGCKNTDEVF NYLLSHMKET IKGWDFFVAW EKVMNKVGSV
60 70 80 90 100
EVVLNILNYL VGKENVVEEF KMLLGRYPEI AEVLPALLAL REKSIKVVEP
110 120 130 140 150
LADNVFNYKE YVFRKKKKYN PEEIEMLAEF AEKTGLLAMF EKKNIKSVVD
160 170 180 190 200
YAIGVEVGLD TNARKNRSGT AMEMITELFV KKICSMNNYR YLSQATSHKI
210 220 230 240 250
KTSFGYNVSV DKSERSFDFA IDNGHKLYLV ETNYYGGGGS KLKSVAGEFT
260 270 280 290 300
TLFSFIKKET PEHGFIWITD GKGWETAKKP LRESFDKVDY VLNLDMVQKG
310
ILEDIILQGL
Length:310
Mass (Da):35,620
Last modified:March 20, 2007 - v1
Checksum:i948AC69B9E2CC019
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000568 Genomic DNA. Translation: ABN52740.1.
RefSeqiWP_004463892.1. NC_009012.1.
YP_001037933.1. NC_009012.1.

Genome annotation databases

EnsemblBacteriaiABN52740; ABN52740; Cthe_1512.
GeneIDi4810550.
KEGGicth:Cthe_1512.
PATRICi19516845. VBICloThe47081_1602.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000568 Genomic DNA. Translation: ABN52740.1.
RefSeqiWP_004463892.1. NC_009012.1.
YP_001037933.1. NC_009012.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi203119.Cthe_1512.

Protein family/group databases

REBASEi14743. CthORF1513P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN52740; ABN52740; Cthe_1512.
GeneIDi4810550.
KEGGicth:Cthe_1512.
PATRICi19516845. VBICloThe47081_1602.

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Enzyme and pathway databases

BioCyciCTHE203119:GIW8-1566-MONOMER.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372Imported.

Entry informationi

Entry nameiA3DFL1_CLOTH
AccessioniPrimary (citable) accession number: A3DFL1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: January 7, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.