A3DFA2 (A3DFA2_CLOTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase 53 domain protein EMBL ABN52631.1

Gene names

Ordered Locus Names:

Cthe_1400

Organism

Clostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]

Taxonomic identifier

203119 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	415 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABN52631.1
Molecular function	Hydrolase EMBL ABN52631.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL ABN52631.1
	Chain	30 – 415	386	Potential EMBL ABN52631.1		PRO_5000225200

Sequences

	Sequence		Length	Mass (Da)
	A3DFA2 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 3207D11524BBB798	FASTA	415	47,067
	10 20 30 40 50 60 MLSKITKLTV IFILILSVTF LSMPKTYTQA APTFAKGADV SWLPEMEANG YKFYNDDGIE 70 80 90 100 110 120 QDCLQILKDH GIDSIRLRVW VNPPNGYCNK EETIKMALRA KKMGFRIMIN FHYSDSWADP 130 140 150 160 170 180 GKQTKPAAWA KYDFNGLMKA VYDYTYDVMS ALKANGITPE WVQVGNETNN GMLWEDGKAT 190 200 210 220 230 240 NSMRNFAWLI NCGYDAVKAV SPETKVIVHI ANGYDNALYR WIFDGITANG ARFDVIGMSL 250 260 270 280 290 300 YPTASDWPQL TNQCLNNMKD MISRYGKEIM ICEIGMDYWE AQACKDFITD IIQKTKSLPD 310 320 330 340 350 360 NKGLGVFYWE PQCYNWQYYN KGAFDLSGKP TIALDAFLTS DTPDNLIYGD LNGDGRVNST 370 380 390 400 410 DYTLLKRYLL GAIQTFPYER GIKAADLNLD GRINSTDYTV LKRYLLNAIP SLPVK

References

[1]

"Complete sequence of Clostridium thermocellum ATCC 27405." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000568 Genomic DNA. Translation: ABN52631.1.
RefSeq	YP_001037824.1. NC_009012.1.
3D structure databases
ProteinModelPortal	A3DFA2.
SMR	A3DFA2. Positions 346-415.
ModBase	Search...
Protein-protein interaction databases
STRING	A3DFA2.
Protein family/group databases
CAZy	GH53. Glycoside Hydrolase Family 53.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4809061.
GenomeReviews	Gene locus Cthe_1400 in contig CP000568_GR.
KEGG	cth:Cthe_1400.
NMPDR	fig|203119.1.peg.24.
PATRIC	19516605. VBICloThe47081_1482.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3867.
HOGENOM	HBG465679.
OMA	IGMSLYP.
Family and domain databases
InterPro	IPR016134. Cellulos_enz_dockerin_1. IPR002105. Cellulos_enz_dockerin_1_Ca-bd. IPR018242. Dockerin_1. IPR011683. Glyco_hydro_53. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00404. Dockerin_1. 2 hits. PF07745. Glyco_hydro_53. 1 hit. [Graphical view]
SUPFAM	SSF63446. Cellulos_enz_dockerin_1. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00448. CLOS_CELLULOSOME_RPT. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3DFA2_CLOTH

Accession

Primary (citable) accession number: A3DFA2

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)