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A3DE79

- RL32_CLOTH

UniProt

A3DE79 - RL32_CLOTH

Protein

50S ribosomal protein L32

Gene

rpmF

Organism
Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciCTHE203119:GIW8-1062-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L32UniRule annotation
    Gene namesi
    Name:rpmFUniRule annotation
    Ordered Locus Names:Cthe_1026
    OrganismiClostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)
    Taxonomic identifieri203119 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
    ProteomesiUP000002145: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 666650S ribosomal protein L32PRO_0000296451Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi203119.Cthe_1026.

    Structurei

    3D structure databases

    ProteinModelPortaliA3DE79.
    SMRiA3DE79. Positions 3-52.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L32P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0333.
    HOGENOMiHOG000040268.
    KOiK02911.
    OMAiHTACPTC.
    OrthoDBiEOG6VMTT4.

    Family and domain databases

    HAMAPiMF_00340. Ribosomal_L32.
    InterProiIPR002677. Ribosomal_L32p.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view]
    PfamiPF01783. Ribosomal_L32p. 1 hit.
    [Graphical view]
    SUPFAMiSSF57829. SSF57829. 1 hit.
    TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A3DE79-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANPKRKWSK ARTGKRRSQW KLTVPNLVEC PHCHSLKLLH RVCKECGHYT   50
    VRHKGERKSI EVLSVE 66
    Length:66
    Mass (Da):7,762
    Last modified:March 20, 2007 - v1
    Checksum:iBD32826287E4033F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000568 Genomic DNA. Translation: ABN52258.1.
    RefSeqiYP_001037451.1. NC_009012.1.

    Genome annotation databases

    EnsemblBacteriaiABN52258; ABN52258; Cthe_1026.
    GeneIDi4811320.
    KEGGicth:Cthe_1026.
    PATRICi19515785. VBICloThe47081_1078.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000568 Genomic DNA. Translation: ABN52258.1 .
    RefSeqi YP_001037451.1. NC_009012.1.

    3D structure databases

    ProteinModelPortali A3DE79.
    SMRi A3DE79. Positions 3-52.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 203119.Cthe_1026.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABN52258 ; ABN52258 ; Cthe_1026 .
    GeneIDi 4811320.
    KEGGi cth:Cthe_1026.
    PATRICi 19515785. VBICloThe47081_1078.

    Phylogenomic databases

    eggNOGi COG0333.
    HOGENOMi HOG000040268.
    KOi K02911.
    OMAi HTACPTC.
    OrthoDBi EOG6VMTT4.

    Enzyme and pathway databases

    BioCyci CTHE203119:GIW8-1062-MONOMER.

    Family and domain databases

    HAMAPi MF_00340. Ribosomal_L32.
    InterProi IPR002677. Ribosomal_L32p.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view ]
    Pfami PF01783. Ribosomal_L32p. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57829. SSF57829. 1 hit.
    TIGRFAMsi TIGR01031. rpmF_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372.

    Entry informationi

    Entry nameiRL32_CLOTH
    AccessioniPrimary (citable) accession number: A3DE79
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 24, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3