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A3DE79 (RL32_CLOTH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L32
Gene names
Name:rpmF
Ordered Locus Names:Cthe_1026
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length66 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L32P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentlarge ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 666650S ribosomal protein L32 HAMAP-Rule MF_00340
PRO_0000296451

Sequences

Sequence LengthMass (Da)Tools
A3DE79 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: BD32826287E4033F

FASTA667,762
        10         20         30         40         50         60 
MANPKRKWSK ARTGKRRSQW KLTVPNLVEC PHCHSLKLLH RVCKECGHYT VRHKGERKSI 


EVLSVE 

« Hide

References

[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000568 Genomic DNA. Translation: ABN52258.1.
RefSeqYP_001037451.1. NC_009012.1.

3D structure databases

ProteinModelPortalA3DE79.
SMRA3DE79. Positions 3-52.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203119.Cthe_1026.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN52258; ABN52258; Cthe_1026.
GeneID4811320.
KEGGcth:Cthe_1026.
PATRIC19515785. VBICloThe47081_1078.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0333.
HOGENOMHOG000040268.
KOK02911.
OMAHTACPTC.
OrthoDBEOG6VMTT4.

Enzyme and pathway databases

BioCycCTHE203119:GIW8-1062-MONOMER.

Family and domain databases

HAMAPMF_00340. Ribosomal_L32.
InterProIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMSSF57829. SSF57829. 1 hit.
TIGRFAMsTIGR01031. rpmF_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL32_CLOTH
AccessionPrimary (citable) accession number: A3DE79
Entry history
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: March 20, 2007
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries