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A3DE79

- RL32_CLOTH

UniProt

A3DE79 - RL32_CLOTH

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Protein
50S ribosomal protein L32
Gene
rpmF, Cthe_1026
Organism
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciCTHE203119:GIW8-1062-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L32
Gene namesi
Name:rpmF
Ordered Locus Names:Cthe_1026
OrganismiClostridium thermocellum (strain ATCC 27405 / DSM 1237)
Taxonomic identifieri203119 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
ProteomesiUP000002145: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 666650S ribosomal protein L32UniRule annotation
PRO_0000296451Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi203119.Cthe_1026.

Structurei

3D structure databases

ProteinModelPortaliA3DE79.
SMRiA3DE79. Positions 3-52.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0333.
HOGENOMiHOG000040268.
KOiK02911.
OMAiHTACPTC.
OrthoDBiEOG6VMTT4.

Family and domain databases

HAMAPiMF_00340. Ribosomal_L32.
InterProiIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

A3DE79-1 [UniParc]FASTAAdd to Basket

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MANPKRKWSK ARTGKRRSQW KLTVPNLVEC PHCHSLKLLH RVCKECGHYT   50
VRHKGERKSI EVLSVE 66
Length:66
Mass (Da):7,762
Last modified:March 20, 2007 - v1
Checksum:iBD32826287E4033F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000568 Genomic DNA. Translation: ABN52258.1.
RefSeqiYP_001037451.1. NC_009012.1.

Genome annotation databases

EnsemblBacteriaiABN52258; ABN52258; Cthe_1026.
GeneIDi4811320.
KEGGicth:Cthe_1026.
PATRICi19515785. VBICloThe47081_1078.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000568 Genomic DNA. Translation: ABN52258.1 .
RefSeqi YP_001037451.1. NC_009012.1.

3D structure databases

ProteinModelPortali A3DE79.
SMRi A3DE79. Positions 3-52.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 203119.Cthe_1026.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABN52258 ; ABN52258 ; Cthe_1026 .
GeneIDi 4811320.
KEGGi cth:Cthe_1026.
PATRICi 19515785. VBICloThe47081_1078.

Phylogenomic databases

eggNOGi COG0333.
HOGENOMi HOG000040268.
KOi K02911.
OMAi HTACPTC.
OrthoDBi EOG6VMTT4.

Enzyme and pathway databases

BioCyci CTHE203119:GIW8-1062-MONOMER.

Family and domain databases

HAMAPi MF_00340. Ribosomal_L32.
InterProi IPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view ]
Pfami PF01783. Ribosomal_L32p. 1 hit.
[Graphical view ]
SUPFAMi SSF57829. SSF57829. 1 hit.
TIGRFAMsi TIGR01031. rpmF_bact. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27405 / DSM 1237.

Entry informationi

Entry nameiRL32_CLOTH
AccessioniPrimary (citable) accession number: A3DE79
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: March 20, 2007
Last modified: September 3, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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