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A3DDQ9 (A3DDQ9_CLOTH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Shikimate dehydrogenase HAMAP MF_00222
EC=1.1.1.25 HAMAP MF_00222
Gene names
Name:aroE HAMAP MF_00222
Ordered Locus Names:Cthe_0854
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length298 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding136 – 1405NADP By similarity HAMAP MF_00222

Sites

Active site751Proton acceptor By similarity HAMAP MF_00222

Sequences

Sequence LengthMass (Da)Tools
A3DDQ9 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: C0DD9CF378A0433F

FASTA29833,323
        10         20         30         40         50         60 
MDIDVRVTGK TKLLGLVGNP VEHSISPQLH NTLSSLLGLD IVYIPLAVGK EDLETVVKAL 

        70         80         90        100        110        120 
KALDFIGFNV TIPYKRDIMK YLDENSKEAI LMGAVNTVKK IDGRLYGYNT DAEGFLRSFK 

       130        140        150        160        170        180 
EEAGVGFKGK KVVLIGAGGV ARAIAVKIAS EDAEKISVVN RTVEKSVELA EVVNENIKEI 

       190        200        210        220        230        240 
VQVYNFEDKT FRMAFEESDI IINTTSVGMY PKTRETPVKF TECFNKNQIV YDVIYNPEKT 

       250        260        270        280        290 
KFLNDAEKRG AKIINGLGML FYQGISAYEI WTGVKFTEDK LKSVYESFKK YLQLKSAK

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References

[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000568 Genomic DNA. Translation: ABN52088.1.
RefSeqYP_001037281.1. NC_009012.1.

3D structure databases

ProteinModelPortalA3DDQ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3DDQ9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4810472.
GenomeReviewsGene locus Cthe_0854 in contig CP000568_GR.
KEGGcth:Cthe_0854.
NMPDRfig|203119.1.peg.269.
PATRIC19515419. VBICloThe47081_0898.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0169.
HOGENOMHBG553408.
OMAFANATIV.
ProtClustDBCLSK2471724.

Family and domain databases

HAMAPMF_00222. Shikimate_DH_AroE.
[Tree]
InterProIPR016040. NAD(P)-bd_dom.
IPR011342. Shikimate_DH.
IPR013708. Shikimate_DH-bd_N.
IPR022893. Shikimate_quinate_DH.
IPR006151. Shikm_DH/Glu-tRNA_Rdtase.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00014.
PfamPF01488. Shikimate_DH. 1 hit.
PF08501. Shikimate_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00507. AroE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA3DDQ9_CLOTH
AccessionPrimary (citable) accession number: A3DDQ9
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info