A3DDK1 (A3DDK1_CLOTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ABN52030.1

Gene names

Ordered Locus Names:

Cthe_0795

Organism

Clostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]

Taxonomic identifier

203119 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	575 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3DDK1 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 5867AA344CFDC687	FASTA	575	67,535
	10 20 30 40 50 60 MKLEAIYHKP YSEFAFPVAP DTLVIRLRTA KNDVNTCILI YHEKYDTSQR GKVKMDKVAS 70 80 90 100 110 120 DGMFDYYEVE LNVGIKRIKY MFYLEDNYSI KWYSSDGFFD YMPQWGHFTY SYICKDDIFH 130 140 150 160 170 180 EVEWFRNSTI YQIFPDRFAK FPPDTENSGK RTIHGGNIKG IIDRFDHLVK LGVDVVYLNP 190 200 210 220 230 240 IFKSESYHRY DVVDYYEIDP MFGSKEELRE LMDLCHKNGI KVIFDGVFNH SGDKFFAFRD 250 260 270 280 290 300 VVEKGEKSKY ANWYFINSFP VQGYPRPNYE CFSFYGGMPK LNTGNPETAK YFLDVVKYWT 310 320 330 340 350 360 VEFGVDGWRL DAADEVDRKF WRKLRDMLKD LNKDVVLIGE IFDEASSWLW GDQFDSVINY 370 380 390 400 410 420 PLKAMINDLF AYRSIDVETF RNRISGYIMK FNKKVLSSLV NIISTHDTPR FLTLCNGDEK 430 440 450 460 470 480 RFEMAVVFQF TFPGVPLIYY GDEIGMEGEG DPDCRRPMIW DEAKWNKKTL ELYKFLIGLR 490 500 510 520 530 540 KRFDALRTGE YGELPVTGCN GILAYRRGRG ENGIIVAMNT LDRKENVVVE TGDSFDTVKA 550 560 570 FESLKDEERL NVDKKRINIC LNPFEWRIYK ACGEL

References

[1]

"Complete sequence of Clostridium thermocellum ATCC 27405." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000568 Genomic DNA. Translation: ABN52030.1.
RefSeq	YP_001037223.1. NC_009012.1.
3D structure databases
ProteinModelPortal	A3DDK1.
ModBase	Search...
Protein-protein interaction databases
STRING	A3DDK1.
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4810413.
GenomeReviews	Gene locus Cthe_0795 in contig CP000568_GR.
KEGG	cth:Cthe_0795.
NMPDR	fig|203119.1.peg.1217.
PATRIC	19515295. VBICloThe47081_0836.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG726713.
OMA	ETVWYQI.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3DDK1_CLOTH

Accession

Primary (citable) accession number: A3DDK1

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)