A3DDH1 (RL19_CLOTH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L19

Gene names

Name:	rplS
Ordered Locus Names:	Cthe_0765

Organism

Clostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]

Taxonomic identifier

203119 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	114 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP MF_00402
Sequence similarities	Belongs to the ribosomal protein L19P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 114	114	50S ribosomal protein L19 HAMAP MF_00402		PRO_1000049666

Sequences

	Sequence		Length	Mass (Da)
	A3DDH1 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 65611A73FBA98143	FASTA	114	12,932
	10 20 30 40 50 60 MDIIKAIEQE QLKKDVPDFS IGDYVRVNVK VKEGNRERIQ AFEGTVIAKK GSGISETFTV 70 80 90 100 110 RKISYGVGVE RIFPVHSPRV AGIEVIRKGK VRRAKLYYLR ERVGKSAKVK TKLE

References

[1]

"Complete sequence of Clostridium thermocellum ATCC 27405." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000568 Genomic DNA. Translation: ABN52000.1.
RefSeq	YP_001037193.1. NC_009012.1.
3D structure databases
ProteinModelPortal	A3DDH1.
SMR	A3DDH1. Positions 2-113.
ModBase	Search...
Protein-protein interaction databases
STRING	A3DDH1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4810383.
GenomeReviews	Gene locus Cthe_0765 in contig CP000568_GR.
KEGG	cth:Cthe_0765.
PATRIC	19515237. VBICloThe47081_0807.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0335.
HOGENOM	HBG611003.
OMA	FPLHSPI.
ProtClustDB	PRK05338.
Family and domain databases
HAMAP	MF_00402. Ribosomal_L19. [Tree]
InterPro	IPR001857. Ribosomal_L19. IPR018257. Ribosomal_L19_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
KO	K02884.
PANTHER	PTHR15680. Ribosomal_L19. 1 hit.
Pfam	PF01245. Ribosomal_L19. 1 hit. [Graphical view]
PIRSF	PIRSF002191. Ribosomal_L19. 1 hit.
PRINTS	PR00061. RIBOSOMALL19.
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01024. RplS_bact. 1 hit.
PROSITE	PS01015. RIBOSOMAL_L19. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL19_CLOTH

Accession

Primary (citable) accession number: A3DDH1

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	March 20, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program