A3DC42 (A3DC42_CLOTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase 1 HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase 1 HAMAP MF_00484

Gene names

Name:	glgA1 HAMAP MF_00484
Ordered Locus Names:	Cthe_0282

Organism

Clostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]

Taxonomic identifier

203119 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 EMBL ABN51521.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	18	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	A3DC42 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: C19CC6D394766955	FASTA	480	55,729
	10 20 30 40 50 60 MKKIKVLFAS SEVDPFAKTG GLADVASSLP KALCKLGHDV RVVMPKYKDI PFQYVEKMQK 70 80 90 100 110 120 VGEIGVYVSW RRQYCGILKL EMDNITYYFI DNEYYFKRDG YYGYYDEAER FAFFSKAVLE 130 140 150 160 170 180 ILPVIGFKPD IIHCNDWQTG VVSAFLNAWY KGLDFYKDIK TVFTIHNLKY QGIFPKEVFG 190 200 210 220 230 240 EVLGLPWDYF HADGIEFYDK VNYLKAGIVY SDIITTVSKT YAEEIKTDFF GENLNNVLRK 250 260 270 280 290 300 RSNDLYGILN GIDMEENDPA VDNRIFANYS VDNLEGKLTN KQMLQKSLGL QERIDIPLIG 310 320 330 340 350 360 IISRLVAQKG FDLIDYVMDE ILKMDIQFVL LGAGEYRYEQ MFRYYQEKYP GKISVNLKYD 370 380 390 400 410 420 AVLAQRIYAG ADMFLMPSLF EPCGLSQMFS LRYGTIPIVR ETGGLKDTIT PYNDITHEGN 430 440 450 460 470 480 GFTFSRYNAH DMLYAIKEAV HYYYHRSTWT YLMKKGMTTD FSWEKSAKEY LELYEKLAGN

References

[1]

"Complete sequence of Clostridium thermocellum ATCC 27405." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000568 Genomic DNA. Translation: ABN51521.1.
RefSeq	YP_001036714.1. NC_009012.1.
3D structure databases
ProteinModelPortal	A3DC42.
ModBase	Search...
Protein-protein interaction databases
STRING	A3DC42.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4808565.
GenomeReviews	Gene locus Cthe_0282 in contig CP000568_GR.
KEGG	cth:Cthe_0282.
NMPDR	fig|203119.1.peg.2263.
PATRIC	19514203. VBICloThe47081_0299.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HBG596384.
OMA	PIVHEIG.
ProtClustDB	CLSK2471588.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A3DC42_CLOTH

Accession

Primary (citable) accession number: A3DC42

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)