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A3DC06 (A3DC06_CLOTH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Carbohydrate binding family 6 EMBL ABN51485.1
Gene names
Ordered Locus Names:Cthe_0246
OrganismClostridium thermocellum (strain ATCC 27405 / DSM 1237) [Complete proteome] [HAMAP]
Taxonomic identifier203119 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length820 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABN51485.1
Chain26 – 820795 Potential EMBL ABN51485.1
PRO_5000225050

Sequences

Sequence LengthMass (Da)Tools
A3DC06 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: 7AA82F6FC5B260E6

FASTA82089,476
        10         20         30         40         50         60 
MKKTLVFLTA LSLIFTLFIS YSLSAGPAST KYGDLNADGK INSTDYNLGK RLILRTISEL 

        70         80         90        100        110        120 
PISNGSVAFD LNGDSKVDST DLTALKRYLL GVIDKFPVGT DIPSQTQKTR YQAEDAMLYK 

       130        140        150        160        170        180 
AFEETIHAGY DGRSYVNYDN EPGGYIEWNV NVSSSGTYKL IFRYANGSNN NRPMEIRVNS 

       190        200        210        220        230        240 
NLVAGSLDFY PTSAWTVWND QSIVVTLNAG NNVIRATGIA SDGGPNVDYL EVIPTNEPPA 

       250        260        270        280        290        300 
PTPSPTPTVG PTPAGARQME RLDRGLVAVK VNNGVFLSWR MFGTDPSNIA FNLYRNGTKI 

       310        320        330        340        350        360 
NSTPITGATN YVDTGGTTSS TYTVRAVING QEQEASKPVS VWAQNYLQIP IQPPSSAYEA 

       370        380        390        400        410        420 
NDCSAADLDG DGEYEIVLKW EPNNAKDNSQ SGYTDNVYLD AYKLNGTRLW RIDLGRNIRA 

       430        440        450        460        470        480 
GAHYTQFMVY DLDGDGKAEV ACKTADGTRD GKGNVIGNPN ADYRNSSGYI LSGPEYLTVF 

       490        500        510        520        530        540 
DGQTGAAITT VDYDPPRGNV SSWGDNYGNR VDRFLACIAY LDGQRPSLVM CRGYYTRSVL 

       550        560        570        580        590        600 
VAWDFRNGRL TKRWVFDGNN YSGYNGQGNH NLSVADVDGD GRDEIIYGAC TIDDNGKGLY 

       610        620        630        640        650        660 
TSGLGHGDAL HVGDLNPNRP GLEIWSCFES SGGAALRDAR TGEVLFRWHR SSDTGRACAA 

       670        680        690        700        710        720 
DITASSPGAE LWAAGSPLFS CTGQNIGTAP SQINFAIWWD GDELRELLDG ITISKYGVGT 

       730        740        750        760        770        780 
LFTATGCASN NGTKSTPCLQ ADLLGDWREE VIFRTSDNRY LRIYTTTATT NRRIYTLMHD 

       790        800        810        820 
PVYRLGIAWQ NVAYNQPPHT SFFIGAGMAE PPKPNIYLVP

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References

[1]"Complete sequence of Clostridium thermocellum ATCC 27405."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Wu J.H.D., Newcomb M., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27405 / DSM 1237.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000568 Genomic DNA. Translation: ABN51485.1.
RefSeqYP_001036678.1. NC_009012.1.

3D structure databases

ProteinModelPortalA3DC06.
SMRA3DC06. Positions 255-817.
ModBaseSearch...

Protein-protein interaction databases

STRINGA3DC06.

Protein family/group databases

CAZyCBM35. Carbohydrate-Binding Module Family 35.
PL11. Polysaccharide Lyase Family 11.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4808594.
GenomeReviewsGene locus Cthe_0246 in contig CP000568_GR.
KEGGcth:Cthe_0246.
NMPDRfig|203119.1.peg.674.
PATRIC19514121. VBICloThe47081_0258.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG04883.
HOGENOMHBG425203.
OMAWRIDLGR.

Family and domain databases

InterProIPR016134. Cellulos_enz_dockerin_1.
IPR002105. Cellulos_enz_dockerin_1_Ca-bd.
IPR005084. CMB_fam6.
IPR018242. Dockerin_1.
IPR008979. Galactose-bd-like.
[Graphical view]
Gene3DG3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit.
PfamPF03422. CBM_6. 1 hit.
PF00404. Dockerin_1. 1 hit.
[Graphical view]
SUPFAMSSF63446. Cellulos_enz_dockerin_1. 1 hit.
SSF49785. Gal_bind_like. 1 hit.
PROSITEPS51175. CBM6. 1 hit.
PS00448. CLOS_CELLULOSOME_RPT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA3DC06_CLOTH
AccessionPrimary (citable) accession number: A3DC06
Entry history
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info