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A3D6B7

- GH109_SHEB5

UniProt

A3D6B7 - GH109_SHEB5

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Protein

Glycosyl hydrolase family 109 protein

Gene
Sbal_2793
Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Glycosidase By similarity.

Cofactori

Binds 1 NAD+ per subunit. The NAD cannot dissociate By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei86 – 861NAD By similarity
Binding sitei184 – 1841NAD By similarity
Binding sitei213 – 2131Substrate By similarity
Binding sitei232 – 2321Substrate By similarity
Binding sitei244 – 2441NAD By similarity
Binding sitei326 – 3261Substrate By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi64 – 652NAD By similarity
Nucleotide bindingi135 – 1384NAD By similarity
Nucleotide bindingi155 – 1562NAD By similarity

GO - Molecular functioni

  1. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW
  2. oxidoreductase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Ligandi

NAD

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-2864-MONOMER.

Protein family/group databases

CAZyiGH109. Glycoside Hydrolase Family 109.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycosyl hydrolase family 109 protein (EC:3.2.1.-)
Gene namesi
Ordered Locus Names:Sbal_2793
OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)
Taxonomic identifieri325240 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001557: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131Tat-type signal Reviewed predictionAdd
BLAST
Chaini32 – 459428Glycosyl hydrolase family 109 proteinPRO_5000224660Add
BLAST

Post-translational modificationi

Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.

Interactioni

Protein-protein interaction databases

STRINGi325240.Sbal_2793.

Structurei

3D structure databases

ProteinModelPortaliA3D6B7.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni244 – 2474Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG125103.
HOGENOMiHOG000252553.
OMAiHNIHRRH.
OrthoDBiEOG61P6MK.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF10518. TAT_signal. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01409. TAT_signal_seq. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A3D6B7-1 [UniParc]FASTAAdd to Basket

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MHNIHRRNFL KAAGAATAGL VTANIALNAY ASSVAPKPQA GKSVIGLIAP    50
KMDVVRVGFI GVGERGFSHV EQFCHLEGVE LKAICDTHQA VLDRAVDHIV 100
KQNRPKPAVY TGNDLSYRDL LSRDDIDIVI ISTPWEWHAP MAIETMESGK 150
HAFVEVPMAL TVEECWQVVD TAERTQKNCM MMENVNYGRE ELMVLNMVRQ 200
GVFGELLHGE AAYIHELRWQ MKEIDHKTGS WRTYWHTKRN GNLYPTHGLG 250
PVSQYMNINR GDRFDYLTSM SSPALGRALY AKREFPADHE RNQLKYINGD 300
INTSLIKTVK GRTIMVQHDT TTPRPYSRHN LIQGTNGVFA GFPNRIAVEN 350
GGFGQSYHEW DMDMQKWYDK YDHPLWQRIG KEAEINGGHG GMDFVMLWRM 400
IYCLRNGEAL DQDVYDGASW SVVNILSEHS LNDRSNSVTF PDFTRGAWQT 450
AKPLGIVGA 459
Length:459
Mass (Da):51,893
Last modified:March 20, 2007 - v1
Checksum:i73B38A8DE6ADDFAA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000563 Genomic DNA. Translation: ABN62280.1.
RefSeqiYP_001051149.1. NC_009052.1.

Genome annotation databases

EnsemblBacteriaiABN62280; ABN62280; Sbal_2793.
GeneIDi4842508.
KEGGisbl:Sbal_2793.
PATRICi37184670. VBISheBal55297_3140.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000563 Genomic DNA. Translation: ABN62280.1 .
RefSeqi YP_001051149.1. NC_009052.1.

3D structure databases

ProteinModelPortali A3D6B7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 325240.Sbal_2793.

Protein family/group databases

CAZyi GH109. Glycoside Hydrolase Family 109.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABN62280 ; ABN62280 ; Sbal_2793 .
GeneIDi 4842508.
KEGGi sbl:Sbal_2793.
PATRICi 37184670. VBISheBal55297_3140.

Phylogenomic databases

eggNOGi NOG125103.
HOGENOMi HOG000252553.
OMAi HNIHRRH.
OrthoDBi EOG61P6MK.

Enzyme and pathway databases

BioCyci SBAL325240:GCTA-2864-MONOMER.

Family and domain databases

Gene3Di 3.40.50.720. 2 hits.
InterProi IPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
[Graphical view ]
Pfami PF01408. GFO_IDH_MocA. 1 hit.
PF10518. TAT_signal. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01409. TAT_signal_seq. 1 hit.
PROSITEi PS51318. TAT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS155 / ATCC BAA-1091.

Entry informationi

Entry nameiGH109_SHEB5
AccessioniPrimary (citable) accession number: A3D6B7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: March 20, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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