Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glycosyl hydrolase family 109 protein

Gene

Sbal_2793

Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Glycosidase.By similarity

Cofactori

NAD(+)By similarityNote: Binds 1 NAD(+) per subunit. The NAD(+) cannot dissociate.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei86 – 861NADBy similarity
Binding sitei184 – 1841NADBy similarity
Binding sitei213 – 2131SubstrateBy similarity
Binding sitei232 – 2321SubstrateBy similarity
Binding sitei244 – 2441NADBy similarity
Binding sitei326 – 3261SubstrateBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi64 – 652NADBy similarity
Nucleotide bindingi135 – 1384NADBy similarity
Nucleotide bindingi155 – 1562NADBy similarity

GO - Molecular functioni

  1. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW
  2. oxidoreductase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Ligandi

NAD

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-2864-MONOMER.

Protein family/group databases

CAZyiGH109. Glycoside Hydrolase Family 109.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycosyl hydrolase family 109 protein (EC:3.2.1.-)
Gene namesi
Ordered Locus Names:Sbal_2793
OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)
Taxonomic identifieri325240 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001557: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131Tat-type signalPROSITE-ProRule annotationAdd
BLAST
Chaini32 – 459428Glycosyl hydrolase family 109 proteinPRO_5000224660Add
BLAST

Post-translational modificationi

Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.

Interactioni

Protein-protein interaction databases

STRINGi325240.Sbal_2793.

Structurei

3D structure databases

ProteinModelPortaliA3D6B7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni244 – 2474Substrate bindingBy similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG125103.
HOGENOMiHOG000252553.
OMAiMESGKHA.
OrthoDBiEOG61P6MK.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF10518. TAT_signal. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01409. TAT_signal_seq. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A3D6B7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHNIHRRNFL KAAGAATAGL VTANIALNAY ASSVAPKPQA GKSVIGLIAP
60 70 80 90 100
KMDVVRVGFI GVGERGFSHV EQFCHLEGVE LKAICDTHQA VLDRAVDHIV
110 120 130 140 150
KQNRPKPAVY TGNDLSYRDL LSRDDIDIVI ISTPWEWHAP MAIETMESGK
160 170 180 190 200
HAFVEVPMAL TVEECWQVVD TAERTQKNCM MMENVNYGRE ELMVLNMVRQ
210 220 230 240 250
GVFGELLHGE AAYIHELRWQ MKEIDHKTGS WRTYWHTKRN GNLYPTHGLG
260 270 280 290 300
PVSQYMNINR GDRFDYLTSM SSPALGRALY AKREFPADHE RNQLKYINGD
310 320 330 340 350
INTSLIKTVK GRTIMVQHDT TTPRPYSRHN LIQGTNGVFA GFPNRIAVEN
360 370 380 390 400
GGFGQSYHEW DMDMQKWYDK YDHPLWQRIG KEAEINGGHG GMDFVMLWRM
410 420 430 440 450
IYCLRNGEAL DQDVYDGASW SVVNILSEHS LNDRSNSVTF PDFTRGAWQT

AKPLGIVGA
Length:459
Mass (Da):51,893
Last modified:March 20, 2007 - v1
Checksum:i73B38A8DE6ADDFAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000563 Genomic DNA. Translation: ABN62280.1.
RefSeqiYP_001051149.1. NC_009052.1.

Genome annotation databases

EnsemblBacteriaiABN62280; ABN62280; Sbal_2793.
GeneIDi4842508.
KEGGisbl:Sbal_2793.
PATRICi37184670. VBISheBal55297_3140.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000563 Genomic DNA. Translation: ABN62280.1.
RefSeqiYP_001051149.1. NC_009052.1.

3D structure databases

ProteinModelPortaliA3D6B7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi325240.Sbal_2793.

Protein family/group databases

CAZyiGH109. Glycoside Hydrolase Family 109.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN62280; ABN62280; Sbal_2793.
GeneIDi4842508.
KEGGisbl:Sbal_2793.
PATRICi37184670. VBISheBal55297_3140.

Phylogenomic databases

eggNOGiNOG125103.
HOGENOMiHOG000252553.
OMAiMESGKHA.
OrthoDBiEOG61P6MK.

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-2864-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
PF10518. TAT_signal. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01409. TAT_signal_seq. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS155 / ATCC BAA-1091.

Entry informationi

Entry nameiGH109_SHEB5
AccessioniPrimary (citable) accession number: A3D6B7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: March 20, 2007
Last modified: February 4, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.