A3D536 (A3D536_SHEB5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LacI family EMBL ABN61849.1

Gene names

Ordered Locus Names:

Sbal_2356 EMBL ABN61849.1

Organism

Shewanella baltica (strain OS155 / ATCC BAA-1091) [Complete proteome] [HAMAP] EMBL ABN61849.1

Taxonomic identifier

325240 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella baltica

Protein attributes

Sequence length	348 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lacI-type DNA-binding domain. SAAS SAAS000843

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS001761 RuleBase RU000708
Ligand	DNA-binding SAAS SAAS001761 RuleBase RU000708
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A3D536 [UniParc]. Last modified March 20, 2007. Version 1. Checksum: 5ED37C475953A837	FASTA	348	37,715
	10 20 30 40 50 60 MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV DKNASNLRTQ 70 80 90 100 110 120 NSHTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY DLLVSFQQLS SDWHADYEDS 130 140 150 160 170 180 NKADGIILLG YGDYMDYEQK LERLLAQNTH FVIWGAEHNN KSVLSIGCDN HQGGLIATEH 190 200 210 220 230 240 LISLGRNAFA FLGDASSHSP EFRDRYLGHV KALQTANIPV DRTKQVSAIS TESSGYDAAM 250 260 270 280 290 300 VLIAQGAKFD AIFAASDLIA IGAIRALKEK GISVPEQVAV VGYDDIPVAS FANPPLTTIK 310 320 330 340 QNTQLAGEIL VDSVLKLIRG QEVSAQLIPT TLVVRSSCGI DSAPLKPL

References

[1]

"Complete sequence of chromosome of Shewanella baltica OS155." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS155 / ATCC BAA-1091.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000563 Genomic DNA. Translation: ABN61849.1.
RefSeq	YP_001050718.1. NC_009052.1.
3D structure databases
ProteinModelPortal	A3D536.
ModBase	Search...
Protein-protein interaction databases
STRING	325240.Sbal_2356.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABN61849; ABN61849; Sbal_2356.
GeneID	4841826.
KEGG	sbl:Sbal_2356.
PATRIC	37183710. VBISheBal55297_2679.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1609.
HOGENOM	HOG000220179.
KO	K01775.
OMA	SSCGIDH.
ProtClustDB	CLSK903535.
Enzyme and pathway databases
BioCyc	SBAL325240:GCTA-2408-MONOMER.
Family and domain databases
Gene3D	1.10.260.40. 1 hit.
InterPro	IPR010982. Lambda_DNA-bd_dom. IPR000843. Tscrpt_reg_HTH_LacI. [Graphical view]
Pfam	PF00356. LacI. 1 hit. [Graphical view]
SMART	SM00354. HTH_LACI. 1 hit. [Graphical view]
SUPFAM	SSF47413. Lambda_like_DNA. 1 hit.
PROSITE	PS50932. HTH_LACI_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A3D536_SHEB5

Accession

Primary (citable) accession number: A3D536

Entry history

Integrated into UniProtKB/TrEMBL:	March 20, 2007
Last sequence update:	March 20, 2007
Last modified:	May 29, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)