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A3D536

- A3D536_SHEB5

UniProt

A3D536 - A3D536_SHEB5

Protein
Submitted name:

Transcriptional regulator, LacI family

Gene

Sbal_2356

Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (20 Mar 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciSBAL325240:GCTA-2408-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator, LacI familyImported
    Gene namesi
    Ordered Locus Names:Sbal_2356Imported
    OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)Imported
    Taxonomic identifieri325240 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000001557: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi325240.Sbal_2356.

    Structurei

    3D structure databases

    ProteinModelPortaliA3D536.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains HTH lacI-type DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG1609.
    HOGENOMiHOG000220179.
    KOiK01775.
    OMAiGRNAFAF.
    OrthoDBiEOG6SJJMM.

    Family and domain databases

    Gene3Di1.10.260.40. 1 hit.
    InterProiIPR010982. Lambda_DNA-bd_dom.
    IPR028082. Peripla_BP_I.
    IPR000843. Tscrpt_reg_HTH_LacI.
    [Graphical view]
    PfamiPF00356. LacI. 1 hit.
    [Graphical view]
    SMARTiSM00354. HTH_LACI. 1 hit.
    [Graphical view]
    SUPFAMiSSF47413. SSF47413. 1 hit.
    SSF53822. SSF53822. 1 hit.
    PROSITEiPS50932. HTH_LACI_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A3D536-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV    50
    DKNASNLRTQ NSHTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY 100
    DLLVSFQQLS SDWHADYEDS NKADGIILLG YGDYMDYEQK LERLLAQNTH 150
    FVIWGAEHNN KSVLSIGCDN HQGGLIATEH LISLGRNAFA FLGDASSHSP 200
    EFRDRYLGHV KALQTANIPV DRTKQVSAIS TESSGYDAAM VLIAQGAKFD 250
    AIFAASDLIA IGAIRALKEK GISVPEQVAV VGYDDIPVAS FANPPLTTIK 300
    QNTQLAGEIL VDSVLKLIRG QEVSAQLIPT TLVVRSSCGI DSAPLKPL 348
    Length:348
    Mass (Da):37,715
    Last modified:March 20, 2007 - v1
    Checksum:i5ED37C475953A837
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000563 Genomic DNA. Translation: ABN61849.1.
    RefSeqiYP_001050718.1. NC_009052.1.

    Genome annotation databases

    EnsemblBacteriaiABN61849; ABN61849; Sbal_2356.
    GeneIDi4841826.
    KEGGisbl:Sbal_2356.
    PATRICi37183710. VBISheBal55297_2679.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000563 Genomic DNA. Translation: ABN61849.1 .
    RefSeqi YP_001050718.1. NC_009052.1.

    3D structure databases

    ProteinModelPortali A3D536.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 325240.Sbal_2356.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABN61849 ; ABN61849 ; Sbal_2356 .
    GeneIDi 4841826.
    KEGGi sbl:Sbal_2356.
    PATRICi 37183710. VBISheBal55297_2679.

    Phylogenomic databases

    eggNOGi COG1609.
    HOGENOMi HOG000220179.
    KOi K01775.
    OMAi GRNAFAF.
    OrthoDBi EOG6SJJMM.

    Enzyme and pathway databases

    BioCyci SBAL325240:GCTA-2408-MONOMER.

    Family and domain databases

    Gene3Di 1.10.260.40. 1 hit.
    InterProi IPR010982. Lambda_DNA-bd_dom.
    IPR028082. Peripla_BP_I.
    IPR000843. Tscrpt_reg_HTH_LacI.
    [Graphical view ]
    Pfami PF00356. LacI. 1 hit.
    [Graphical view ]
    SMARTi SM00354. HTH_LACI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47413. SSF47413. 1 hit.
    SSF53822. SSF53822. 1 hit.
    PROSITEi PS50932. HTH_LACI_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS155 / ATCC BAA-1091Imported.

    Entry informationi

    Entry nameiA3D536_SHEB5
    AccessioniPrimary (citable) accession number: A3D536
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 20, 2007
    Last sequence update: March 20, 2007
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3