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Protein
Submitted name:

Transcriptional regulator, LacI family

Gene

Sbal_2356

Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-2367-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LacI familyImported
Gene namesi
Ordered Locus Names:Sbal_2356Imported
OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)Imported
Taxonomic identifieri325240 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001557 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi325240.Sbal_2356.

Structurei

3D structure databases

ProteinModelPortaliA3D536.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 59HTH lacI-type DNA-bindingInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiENOG4105E2I. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
KOiK01775.
OMAiSSCGIDH.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
Gene3Di1.10.260.40. 1 hit.
InterProiIPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3D536-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV
60 70 80 90 100
DKNASNLRTQ NSHTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY
110 120 130 140 150
DLLVSFQQLS SDWHADYEDS NKADGIILLG YGDYMDYEQK LERLLAQNTH
160 170 180 190 200
FVIWGAEHNN KSVLSIGCDN HQGGLIATEH LISLGRNAFA FLGDASSHSP
210 220 230 240 250
EFRDRYLGHV KALQTANIPV DRTKQVSAIS TESSGYDAAM VLIAQGAKFD
260 270 280 290 300
AIFAASDLIA IGAIRALKEK GISVPEQVAV VGYDDIPVAS FANPPLTTIK
310 320 330 340
QNTQLAGEIL VDSVLKLIRG QEVSAQLIPT TLVVRSSCGI DSAPLKPL
Length:348
Mass (Da):37,715
Last modified:March 20, 2007 - v1
Checksum:i5ED37C475953A837
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000563 Genomic DNA. Translation: ABN61849.1.
RefSeqiWP_011846920.1. NC_009052.1.

Genome annotation databases

EnsemblBacteriaiABN61849; ABN61849; Sbal_2356.
KEGGisbl:Sbal_2356.
PATRICi37183710. VBISheBal55297_2679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000563 Genomic DNA. Translation: ABN61849.1.
RefSeqiWP_011846920.1. NC_009052.1.

3D structure databases

ProteinModelPortaliA3D536.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi325240.Sbal_2356.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN61849; ABN61849; Sbal_2356.
KEGGisbl:Sbal_2356.
PATRICi37183710. VBISheBal55297_2679.

Phylogenomic databases

eggNOGiENOG4105E2I. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
KOiK01775.
OMAiSSCGIDH.

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-2367-MONOMER.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
Gene3Di1.10.260.40. 1 hit.
InterProiIPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA3D536_SHEB5
AccessioniPrimary (citable) accession number: A3D536
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: November 30, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.