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A3D536

- A3D536_SHEB5

UniProt

A3D536 - A3D536_SHEB5

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Protein
Submitted name:

Transcriptional regulator, LacI family

Gene

Sbal_2356

Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-2408-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LacI familyImported
Gene namesi
Ordered Locus Names:Sbal_2356Imported
OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)Imported
Taxonomic identifieri325240 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001557: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi325240.Sbal_2356.

Structurei

3D structure databases

ProteinModelPortaliA3D536.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains HTH lacI-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1609.
HOGENOMiHOG000220179.
KOiK01775.
OMAiGRNAFAF.
OrthoDBiEOG6SJJMM.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A3D536 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV
60 70 80 90 100
DKNASNLRTQ NSHTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY
110 120 130 140 150
DLLVSFQQLS SDWHADYEDS NKADGIILLG YGDYMDYEQK LERLLAQNTH
160 170 180 190 200
FVIWGAEHNN KSVLSIGCDN HQGGLIATEH LISLGRNAFA FLGDASSHSP
210 220 230 240 250
EFRDRYLGHV KALQTANIPV DRTKQVSAIS TESSGYDAAM VLIAQGAKFD
260 270 280 290 300
AIFAASDLIA IGAIRALKEK GISVPEQVAV VGYDDIPVAS FANPPLTTIK
310 320 330 340
QNTQLAGEIL VDSVLKLIRG QEVSAQLIPT TLVVRSSCGI DSAPLKPL
Length:348
Mass (Da):37,715
Last modified:March 20, 2007 - v1
Checksum:i5ED37C475953A837
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000563 Genomic DNA. Translation: ABN61849.1.
RefSeqiYP_001050718.1. NC_009052.1.

Genome annotation databases

EnsemblBacteriaiABN61849; ABN61849; Sbal_2356.
GeneIDi4841826.
KEGGisbl:Sbal_2356.
PATRICi37183710. VBISheBal55297_2679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000563 Genomic DNA. Translation: ABN61849.1 .
RefSeqi YP_001050718.1. NC_009052.1.

3D structure databases

ProteinModelPortali A3D536.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 325240.Sbal_2356.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABN61849 ; ABN61849 ; Sbal_2356 .
GeneIDi 4841826.
KEGGi sbl:Sbal_2356.
PATRICi 37183710. VBISheBal55297_2679.

Phylogenomic databases

eggNOGi COG1609.
HOGENOMi HOG000220179.
KOi K01775.
OMAi GRNAFAF.
OrthoDBi EOG6SJJMM.

Enzyme and pathway databases

BioCyci SBAL325240:GCTA-2408-MONOMER.

Family and domain databases

Gene3Di 1.10.260.40. 1 hit.
InterProi IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view ]
Pfami PF00356. LacI. 1 hit.
[Graphical view ]
SMARTi SM00354. HTH_LACI. 1 hit.
[Graphical view ]
SUPFAMi SSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEi PS50932. HTH_LACI_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS155 / ATCC BAA-1091Imported.

Entry informationi

Entry nameiA3D536_SHEB5
AccessioniPrimary (citable) accession number: A3D536
Entry historyi
Integrated into UniProtKB/TrEMBL: March 20, 2007
Last sequence update: March 20, 2007
Last modified: October 1, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3