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A3D286

- GLGB_SHEB5

UniProt

A3D286 - GLGB_SHEB5

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei416 – 4161NucleophileUniRule annotation
Active sitei469 – 4691Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-1357-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:Sbal_1331
OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)
Taxonomic identifieri325240 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001557: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7437431,4-alpha-glucan branching enzyme GlgBPRO_1000044997Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi325240.Sbal_1331.

Structurei

3D structure databases

ProteinModelPortaliA3D286.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

A3D286 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMTQANAYFY DGADVALLNG QYTDVFSLLG MHSANEGKAL IVRCFLRNAI
60 70 80 90 100
SVDVISIKDG RKVASLDKVN EQGLFAGTLG RRVKPFLYLL RVEYPLCQLD
110 120 130 140 150
IVDPYQFDSL LNSDDIYLFG EGSAERAYEF LGANWRQTQG VEGVHFCVWA
160 170 180 190 200
PNAKRVSVVG DFNHWDDTRH VMRQHLANGL WELFLPNVVE GAHYKFDLVY
210 220 230 240 250
QNGERHTKSD PMATQMECAP HNASIVPPKA HHSWNDTAWM SKRAATAWHK
260 270 280 290 300
APMSAYEVHL GSWRRKGEQG EQYLDYQDLI EQLIPYVKEQ GFTHIELMPI
310 320 330 340 350
SEFPFDGSWG YQPVGLYAPT HRFGDANGLK AFVDACHQAG IGIILDWVSA
360 370 380 390 400
HFPKDPHGLV RFDGTCLYEH EDPRKGTHPD WDTLIYNYDR GEVRSFLLSN
410 420 430 440 450
ACYWLREFHF DGLRLDAVSS MLYLDYSREP GQWLPNAYGG RENLEAISFL
460 470 480 490 500
QILNQRLYQA FPGICMIAEE STAFAGVTKP TDQQGLGFGF KWNMGWMNDS
510 520 530 540 550
LSYLGRDPLY RQFHHHQLTF SLMYAYTEQF MLSVSHDEVV HGKGSLLHKI
560 570 580 590 600
PGDDWQKFAT LRAYYGFMWG HPGKKLLFMG CEFGQRNEWN HNQSLDWHLL
610 620 630 640 650
AYEPHQGVQR WLKDLNHLYQ AMPALSVQDY EGAGFSWLDC ENSRDSIFTF
660 670 680 690 700
VRYGLAGDAP LVFVINMTPQ LHTGFRIGLP LAGDYREYLN SDSQIYGGSN
710 720 730 740
QGNAGTVVAE SLPWQGMAQS ALITVPPLGC LVIGPATGLA EAN
Length:743
Mass (Da):84,308
Last modified:March 20, 2007 - v1
Checksum:iB01D6A8DBA602D99
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000563 Genomic DNA. Translation: ABN60849.1.
RefSeqiYP_001049718.1. NC_009052.1.

Genome annotation databases

EnsemblBacteriaiABN60849; ABN60849; Sbal_1331.
GeneIDi4842438.
KEGGisbl:Sbal_1331.
PATRICi37181481. VBISheBal55297_1592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000563 Genomic DNA. Translation: ABN60849.1 .
RefSeqi YP_001049718.1. NC_009052.1.

3D structure databases

ProteinModelPortali A3D286.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 325240.Sbal_1331.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABN60849 ; ABN60849 ; Sbal_1331 .
GeneIDi 4842438.
KEGGi sbl:Sbal_1331.
PATRICi 37181481. VBISheBal55297_1592.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci SBAL325240:GCTA-1357-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS155 / ATCC BAA-1091.

Entry informationi

Entry nameiGLGB_SHEB5
AccessioniPrimary (citable) accession number: A3D286
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 20, 2007
Last modified: October 1, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3