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Protein

3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Gene

ubiD

Organism
Shewanella baltica (strain OS155 / ATCC BAA-1091)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol.UniRule annotation

Cofactori

a divalent metal cationUniRule annotation

Pathwayi

GO - Molecular functioni

  1. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity Source: UniProtKB-HAMAP
  2. FMN binding Source: InterPro
  3. oxidoreductase activity Source: InterPro

GO - Biological processi

  1. ubiquinone biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Decarboxylase, Lyase

Keywords - Biological processi

Ubiquinone biosynthesis

Enzyme and pathway databases

BioCyciSBAL325240:GCTA-479-MONOMER.
UniPathwayiUPA00232.

Names & Taxonomyi

Protein namesi
Recommended name:
3-octaprenyl-4-hydroxybenzoate carboxy-lyaseUniRule annotation (EC:4.1.1.-UniRule annotation)
Alternative name(s):
Polyprenyl p-hydroxybenzoate decarboxylaseUniRule annotation
Gene namesi
Name:ubiDUniRule annotation
Ordered Locus Names:Sbal_0465
OrganismiShewanella baltica (strain OS155 / ATCC BAA-1091)
Taxonomic identifieri325240 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001557 Componenti: Chromosome

Subcellular locationi

Cell membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

  1. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 4934933-octaprenyl-4-hydroxybenzoate carboxy-lyasePRO_1000069860Add
BLAST

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi325240.Sbal_0465.

Structurei

3D structure databases

ProteinModelPortaliA3CZT2.
SMRiA3CZT2. Positions 3-487.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UbiD family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0043.
HOGENOMiHOG000227663.
KOiK03182.
OMAiKMGMDAT.
OrthoDBiEOG6QZMM7.

Family and domain databases

HAMAPiMF_01636. UbiD.
InterProiIPR023677. OPHB_Carboxy-lyase.
IPR012349. Split_barrel_FMN-bd.
IPR002830. UbiD.
[Graphical view]
PfamiPF01977. UbiD. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.
TIGRFAMsiTIGR00148. TIGR00148. 1 hit.

Sequencei

Sequence statusi: Complete.

A3CZT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAKGPALLFE
60 70 80 90 100
NPKDHHMPVL VNLFGTPKRV AMALGKDDPL ALREVGELLA FLKEPEPPRG
110 120 130 140 150
FKDAIAKIPM FKQALNMPPK TVRNPPCQQV IKTGDEVDLT QLPIQHCWPG
160 170 180 190 200
DVAPLVTWGL TITKGPRKSR QNLGIYRQQL LGKNKLIMRW LSHRGGALDF
210 220 230 240 250
ADFKQQFPGE RYPVVVALGA DPVTILGAVT PVPDSMSEYA FAGLLRGERT
260 270 280 290 300
EVCKALSCDL EVPATSEIIL EGYIGPEELA EEGPYGDHTG YYNETDKFPV
310 320 330 340 350
FTVTHITHRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIVD
360 370 380 390 400
FYLPPEGCSY RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVIVDE
410 420 430 440 450
DVNCRDWQDV IWAITTRMDP KRDTVMIENT PIDYLDFASP VAGLGSKMGL
460 470 480 490
DATNKWEGET NREWGTPIVM DPKVKQKIDS IWDELGIDDS PTL
Length:493
Mass (Da):55,591
Last modified:March 19, 2007 - v1
Checksum:iF3808B7A48D94F64
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000563 Genomic DNA. Translation: ABN59995.1.
RefSeqiYP_001048864.1. NC_009052.1.

Genome annotation databases

EnsemblBacteriaiABN59995; ABN59995; Sbal_0465.
KEGGisbl:Sbal_0465.
PATRICi37179637. VBISheBal55297_0681.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000563 Genomic DNA. Translation: ABN59995.1.
RefSeqiYP_001048864.1. NC_009052.1.

3D structure databases

ProteinModelPortaliA3CZT2.
SMRiA3CZT2. Positions 3-487.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi325240.Sbal_0465.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABN59995; ABN59995; Sbal_0465.
KEGGisbl:Sbal_0465.
PATRICi37179637. VBISheBal55297_0681.

Phylogenomic databases

eggNOGiCOG0043.
HOGENOMiHOG000227663.
KOiK03182.
OMAiKMGMDAT.
OrthoDBiEOG6QZMM7.

Enzyme and pathway databases

UniPathwayiUPA00232.
BioCyciSBAL325240:GCTA-479-MONOMER.

Family and domain databases

HAMAPiMF_01636. UbiD.
InterProiIPR023677. OPHB_Carboxy-lyase.
IPR012349. Split_barrel_FMN-bd.
IPR002830. UbiD.
[Graphical view]
PfamiPF01977. UbiD. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.
TIGRFAMsiTIGR00148. TIGR00148. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS155 / ATCC BAA-1091.

Entry informationi

Entry nameiUBID_SHEB5
AccessioniPrimary (citable) accession number: A3CZT2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 4, 2008
Last sequence update: March 19, 2007
Last modified: March 31, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.