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A3CZT2 (UBID_SHEB5) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
3-octaprenyl-4-hydroxybenzoate carboxy-lyase

EC=4.1.1.-
Alternative name(s):
Polyprenyl p-hydroxybenzoate decarboxylase
Gene names
Name:ubiD
Ordered Locus Names:Sbal_0465
OrganismShewanella baltica (strain OS155 / ATCC BAA-1091) [Complete proteome] [HAMAP]
Taxonomic identifier325240 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length493 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol By similarity. HAMAP-Rule MF_01636

Cofactor

Divalent metal ions By similarity. HAMAP-Rule MF_01636

Pathway

Cofactor biosynthesis; ubiquinone biosynthesis. HAMAP-Rule MF_01636

Subunit structure

Homohexamer By similarity. HAMAP-Rule MF_01636

Subcellular location

Cell membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01636.

Sequence similarities

Belongs to the UbiD family.

Ontologies

Keywords
   Biological processUbiquinone biosynthesis
   Cellular componentCell membrane
Membrane
   Molecular functionDecarboxylase
Lyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processubiquinone biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Cellular_componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_function3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity

Inferred from electronic annotation. Source: InterPro

FMN binding

Inferred from electronic annotation. Source: InterPro

oxidoreductase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 4934933-octaprenyl-4-hydroxybenzoate carboxy-lyase HAMAP-Rule MF_01636
PRO_1000069860

Sequences

Sequence LengthMass (Da)Tools
A3CZT2 [UniParc].

Last modified March 20, 2007. Version 1.
Checksum: F3808B7A48D94F64

FASTA49355,591
        10         20         30         40         50         60 
MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAKGPALLFE NPKDHHMPVL 

        70         80         90        100        110        120 
VNLFGTPKRV AMALGKDDPL ALREVGELLA FLKEPEPPRG FKDAIAKIPM FKQALNMPPK 

       130        140        150        160        170        180 
TVRNPPCQQV IKTGDEVDLT QLPIQHCWPG DVAPLVTWGL TITKGPRKSR QNLGIYRQQL 

       190        200        210        220        230        240 
LGKNKLIMRW LSHRGGALDF ADFKQQFPGE RYPVVVALGA DPVTILGAVT PVPDSMSEYA 

       250        260        270        280        290        300 
FAGLLRGERT EVCKALSCDL EVPATSEIIL EGYIGPEELA EEGPYGDHTG YYNETDKFPV 

       310        320        330        340        350        360 
FTVTHITHRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIVD FYLPPEGCSY 

       370        380        390        400        410        420 
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVIVDE DVNCRDWQDV IWAITTRMDP 

       430        440        450        460        470        480 
KRDTVMIENT PIDYLDFASP VAGLGSKMGL DATNKWEGET NREWGTPIVM DPKVKQKIDS 

       490 
IWDELGIDDS PTL 

« Hide

References

[1]"Complete sequence of chromosome of Shewanella baltica OS155."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I., Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OS155 / ATCC BAA-1091.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000563 Genomic DNA. Translation: ABN59995.1.
RefSeqYP_001048864.1. NC_009052.1.

3D structure databases

ProteinModelPortalA3CZT2.
SMRA3CZT2. Positions 3-487.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING325240.Sbal_0465.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABN59995; ABN59995; Sbal_0465.
GeneID4844229.
KEGGsbl:Sbal_0465.
PATRIC37179637. VBISheBal55297_0681.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0043.
HOGENOMHOG000227663.
KOK03182.
OMASKMGMDA.
OrthoDBEOG6QZMM7.

Enzyme and pathway databases

BioCycSBAL325240:GCTA-479-MONOMER.
UniPathwayUPA00232.

Family and domain databases

HAMAPMF_01636. UbiD.
InterProIPR023677. OPHB_Carboxy-lyase.
IPR012349. Split_barrel_FMN-bd.
IPR002830. UbiD.
[Graphical view]
PfamPF01977. UbiD. 1 hit.
[Graphical view]
SUPFAMSSF50475. SSF50475. 1 hit.
TIGRFAMsTIGR00148. TIGR00148. 1 hit.
ProtoNetSearch...

Entry information

Entry nameUBID_SHEB5
AccessionPrimary (citable) accession number: A3CZT2
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: March 20, 2007
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways